Factsheet for VIT_14s0066g00820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, golgi, mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
plastid 2
cytosol 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56549	Soybean	golgi	78.7	70.05
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	80.56	69.79
KRG93228	Soybean	golgi	77.78	68.11
GSMUA_Achr2P14170_001	Banana	mitochondrion	76.85	67.85
CDX69574	Canola	mitochondrion	75.93	67.21
CDY09869	Canola	mitochondrion	75.93	67.21
Bra008752.1-P	Field mustard	mitochondrion	75.62	66.94
AT5G14550.1	Thale cress	mitochondrion	76.23	65.52
EES19116	Sorghum	golgi	73.46	62.47
TraesCS1D01G115700.1	Wheat	golgi	73.15	60.93
PGSC0003DMT400001379	Potato	mitochondrion	78.7	60.86
TraesCS1A01G114000.1	Wheat	golgi	73.15	60.77
TraesCS1B01G134300.1	Wheat	golgi	73.15	60.77
Os05t0170000-02	Rice	golgi	74.38	60.4
HORVU0Hr1G039960.6	Barley	golgi	42.59	53.08
VIT_10s0116g00980.t01	Wine grape	golgi	53.7	45.79
Zm00001d009810_P003	Maize	mitochondrion, vacuole	73.46	44.82
VIT_17s0000g03400.t01	Wine grape	cytosol	37.35	40.88
VIT_17s0000g03410.t01	Wine grape	cytosol	36.42	40.0
VIT_01s0011g03840.t01	Wine grape	cytosol	36.42	39.86
VIT_09s0002g02660.t01	Wine grape	cytosol	35.49	39.12
VIT_14s0006g02700.t01	Wine grape	cytosol	35.19	38.51
VIT_17s0000g03420.t01	Wine grape	cytosol	34.26	37.76
VIT_04s0008g00690.t01	Wine grape	golgi, nucleus, plasma membrane, plastid	36.42	30.65
VIT_12s0035g01710.t01	Wine grape	golgi	35.8	30.61
VIT_04s0008g02630.t01	Wine grape	golgi	35.49	29.41
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	36.42	29.28
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	35.49	28.4

Protein Annotations

EntrezGene:100259507	wikigene:100259507	MapMan:35.1	ProteinID:CBI34881	ProteinID:CBI34881.3	UniProt:D7TWK6
EMBL:FN596252	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016740	InterPro:Glyco_trans_14	EntrezGene:LOC100259507	wikigene:LOC100259507	PFAM:PF02485	PANTHER:PTHR31042
PANTHER:PTHR31042:SF6	TIGR:TC65630	UniParc:UPI0001BE4517	ArrayExpress:VIT_14s0066g00820	EnsemblPlantsGene:VIT_14s0066g00820	EnsemblPlants:VIT_14s0066g00820.t01
unigene:Vvi.11132	RefSeq:XP_002275670	RefSeq:XP_002275670.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr14:-:27293967..27302992

Molecular Weight (calculated)

38023.3 Da

IEP (calculated)

8.454

GRAVY (calculated)

-0.455

Length

324 amino acids

Sequence
(BLAST)

001: MPSPFLQRPK IAFLFIARNR LPLDVVWDAF FRDEKENKFS IFVHSRPGFL LNKATTRSVY FLNRQLNDSI QVDWGEASMI QAERILLRSA LLDPLNERFV
101: FLSDSCIPLY NFSYIYDYIM STSTSFVDSF ADTKEGRYNP KMDPVIPVHN WRKGSQWVVL TRKHAQIVVE DDTVFPMFQQ HCKRKSLPEF WRDHPLPADA
201: SKEHNCIPDE HYVQTLLAQE GFEEEITRRS LTHSSWDLSS SKDRERKGWH PLTYKFSDAT PMLIQSIKDI DNIYYETEYR REWCTSKGKP APCFLFARKF
301: TRPAALRLLN MSALGAFHGE TRIS

Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)

001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK

Arabidopsis Description

At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.