Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09869 | Canola | mitochondrion | 85.68 | 88.25 |
| CDX69574 | Canola | mitochondrion | 85.68 | 88.25 |
| Bra008752.1-P | Field mustard | mitochondrion | 85.41 | 87.98 |
| VIT_14s0066g00820.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 65.52 | 76.23 |
| KRH56549 | Soybean | golgi | 65.52 | 67.86 |
| GSMUA_Achr2P14170_001 | Banana | mitochondrion | 65.52 | 67.3 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 66.05 | 66.58 |
| KRG93228 | Soybean | golgi | 64.46 | 65.68 |
| EES19116 | Sorghum | golgi | 62.86 | 62.2 |
| TraesCS1A01G114000.1 | Wheat | golgi | 61.27 | 59.23 |
| TraesCS1D01G115700.1 | Wheat | golgi | 61.01 | 59.13 |
| TraesCS1B01G134300.1 | Wheat | golgi | 61.01 | 58.97 |
| Os05t0170000-02 | Rice | golgi | 62.07 | 58.65 |
| PGSC0003DMT400001379 | Potato | mitochondrion | 64.99 | 58.47 |
| HORVU0Hr1G039960.6 | Barley | golgi | 36.6 | 53.08 |
| AT1G62305.1 | Thale cress | golgi | 46.95 | 46.83 |
| AT1G11940.1 | Thale cress | golgi | 46.95 | 46.21 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 62.07 | 44.07 |
| AT4G31350.4 | Thale cress | golgi | 31.83 | 31.91 |
| AT5G57270.5 | Thale cress | golgi | 32.36 | 31.44 |
| AT5G11730.1 | Thale cress | golgi | 32.1 | 31.35 |
| AT1G51770.1 | Thale cress | golgi | 33.16 | 30.79 |
| AT2G19160.1 | Thale cress | golgi, mitochondrion | 31.57 | 30.2 |
| AT4G25870.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 30.5 | 29.56 |
| AT3G21310.1 | Thale cress | golgi | 29.97 | 29.5 |
| AT4G30060.1 | Thale cress | golgi | 31.3 | 29.43 |
| AT5G16170.1 | Thale cress | golgi | 31.57 | 28.95 |
| AT5G25970.2 | Thale cress | golgi | 29.71 | 28.94 |
| AT1G10280.1 | Thale cress | golgi | 31.57 | 28.88 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 31.57 | 28.47 |
| AT1G10880.1 | Thale cress | golgi | 28.65 | 27.98 |
| AT1G68380.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 28.65 | 27.55 |
| AT1G68390.1 | Thale cress | plastid | 29.44 | 27.21 |
Protein Annotations
| MapMan:35.1 | EntrezGene:831306 | ProteinID:AED92046.1 | ArrayExpress:AT5G14550 | EnsemblPlantsGene:AT5G14550 | RefSeq:AT5G14550 |
| TAIR:AT5G14550 | RefSeq:AT5G14550-TAIR-G | EnsemblPlants:AT5G14550.1 | TAIR:AT5G14550.1 | Unigene:At.31916 | UniProt:B6IDH4 |
| EMBL:BT050412 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 | EMBL:KJ138693 | RefSeq:NP_196959.2 | PFAM:PF02485 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF6 | TMHMM:TMhelix | UniParc:UPI000034F211 | : | : |
Description
At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
Coordinates
chr5:-:4691006..4694055
Molecular Weight (calculated)
44554.2 Da
IEP (calculated)
10.240
GRAVY (calculated)
-0.551
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.