Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 5
- nucleus 1
- extracellular 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68738 | Canola | golgi | 93.62 | 93.62 |
| Bra011262.1-P | Field mustard | golgi | 93.35 | 93.35 |
| CDY28259 | Canola | golgi | 93.35 | 93.35 |
| VIT_04s0008g02630.t01 | Wine grape | golgi | 68.09 | 65.47 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 54.79 | 63.38 |
| Zm00001d024348_P002 | Maize | mitochondrion | 58.51 | 59.46 |
| KRH05009 | Soybean | golgi, mitochondrion | 61.97 | 59.14 |
| KXG24737 | Sorghum | golgi | 60.11 | 59.01 |
| EES12818 | Sorghum | golgi | 60.64 | 58.91 |
| TraesCS2D01G428700.2 | Wheat | mitochondrion | 59.31 | 58.68 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 59.57 | 58.49 |
| KRH16109 | Soybean | mitochondrion | 61.17 | 58.38 |
| TraesCS2B01G452200.4 | Wheat | mitochondrion | 58.78 | 58.16 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 59.84 | 58.14 |
| TraesCS2A01G430900.2 | Wheat | mitochondrion | 59.31 | 57.77 |
| AT2G19160.1 | Thale cress | golgi, mitochondrion | 57.45 | 54.82 |
| AT4G30060.1 | Thale cress | golgi | 58.24 | 54.61 |
| Os08t0225400-01 | Rice | cytosol, golgi | 59.04 | 53.75 |
| AT5G57270.5 | Thale cress | golgi | 55.32 | 53.61 |
| AT4G25870.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 53.72 | 51.93 |
| AT1G10880.1 | Thale cress | golgi | 36.97 | 36.01 |
| AT5G25970.2 | Thale cress | golgi | 36.97 | 35.92 |
| AT5G11730.1 | Thale cress | golgi | 36.7 | 35.75 |
| AT3G21310.1 | Thale cress | golgi | 36.17 | 35.51 |
| AT1G51770.1 | Thale cress | golgi | 36.44 | 33.74 |
| AT1G10280.1 | Thale cress | golgi | 36.44 | 33.25 |
| AT1G68380.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 34.04 | 32.65 |
| AT5G16170.1 | Thale cress | golgi | 35.37 | 32.36 |
| AT1G68390.1 | Thale cress | plastid | 35.11 | 32.35 |
| AT5G14550.1 | Thale cress | mitochondrion | 31.91 | 31.83 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 35.37 | 31.82 |
| AT1G11940.1 | Thale cress | golgi | 30.59 | 30.03 |
| AT1G62305.1 | Thale cress | golgi | 30.05 | 29.89 |
Protein Annotations
| MapMan:35.1 | EntrezGene:829262 | UniProt:A0A178UZZ8 | ProteinID:AEE85895.1 | ProteinID:AEE85896.1 | EMBL:AK118612 |
| ProteinID:ANM67126.1 | ArrayExpress:AT4G31350 | EnsemblPlantsGene:AT4G31350 | RefSeq:AT4G31350 | TAIR:AT4G31350 | RefSeq:AT4G31350-TAIR-G |
| EnsemblPlants:AT4G31350.4 | EMBL:BT002504 | EMBL:BT008472 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 |
| EMBL:KJ676992 | RefSeq:NP_001154280.1 | RefSeq:NP_001328975.1 | RefSeq:NP_194863.4 | ProteinID:OAO98714.1 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF29 | UniProt:Q8GS18 | TMHMM:TMhelix | UniParc:UPI00000AE510 | SEG:seg |
Description
At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
Coordinates
chr4:+:15212497..15215872
Molecular Weight (calculated)
43755.9 Da
IEP (calculated)
8.935
GRAVY (calculated)
-0.223
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.