Factsheet for TraesCS2B01G452200.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G428700.2	Wheat	mitochondrion	97.63	97.63
HORVU2Hr1G100480.3	Barley	cytosol	82.63	96.62
TraesCS2A01G430900.2	Wheat	mitochondrion	97.11	95.6
Zm00001d026261_P001	Maize	golgi, mitochondrion	78.42	77.81
EES12818	Sorghum	golgi	79.21	77.78
Zm00001d002382_P002	Maize	golgi, mitochondrion	78.16	76.74
VIT_04s0008g02630.t01	Wine grape	golgi	66.05	64.19
TraesCS7B01G392700.1	Wheat	golgi	63.68	64.02
TraesCS7B01G320800.1	Wheat	golgi	61.05	62.7
Bra011262.1-P	Field mustard	golgi	59.47	60.11
CDY28259	Canola	golgi	59.47	60.11
CDX68738	Canola	golgi	59.21	59.84
KRH19073	Soybean	golgi	61.84	59.8
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	62.89	59.31
PGSC0003DMT400073984	Potato	golgi	60.79	58.78
AT4G31350.4	Thale cress	golgi	58.16	58.78
CDX89388	Canola	cytosol	35.0	58.33
Solyc07g008940.2.1	Tomato	golgi	60.0	58.02
TraesCS6B01G181900.1	Wheat	golgi	58.42	56.92
KRH02808	Soybean	golgi	61.58	55.71
KRH16109	Soybean	mitochondrion	57.11	55.08
KRH05009	Soybean	golgi, mitochondrion	56.58	54.57
AT5G57270.5	Thale cress	golgi	55.0	53.87
CDY11878	Canola	golgi	54.74	53.47
CDX88613	Canola	golgi	54.74	53.47
CDY38285	Canola	golgi	54.47	53.21
Bra002743.1-P	Field mustard	golgi	54.47	53.21
CDY25922	Canola	golgi	54.47	53.21
Bra036729.1-P	Field mustard	mitochondrion	55.26	53.03
CDY03361	Canola	mitochondrion	55.0	52.91
CDY66853	Canola	mitochondrion	55.0	52.78
CDY51089	Canola	golgi, mitochondrion	54.74	52.66
CDX82625	Canola	mitochondrion	54.47	52.41
Bra010307.1-P	Field mustard	golgi, mitochondrion	55.26	52.37
Bra038843.1-P	Field mustard	mitochondrion	54.74	52.26
AT4G30060.1	Thale cress	golgi	55.0	52.12
AT2G19160.1	Thale cress	golgi, mitochondrion	53.95	52.03
CDY12850	Canola	mitochondrion	54.47	52.01
CDX83505	Canola	mitochondrion	54.47	52.01
Bra012167.1-P	Field mustard	mitochondrion	54.47	51.88
CDY01412	Canola	mitochondrion	54.47	51.88
CDY03552	Canola	golgi, mitochondrion	54.74	51.87
CDY49466	Canola	cytosol	35.0	51.75
Bra013927.1-P	Field mustard	golgi, plastid	49.21	51.09
CDX94406	Canola	golgi	50.79	50.92
CDX92736	Canola	mitochondrion	50.53	50.66
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	51.84	50.64
CDY30178	Canola	mitochondrion	53.16	50.25
CDY42774	Canola	mitochondrion	50.0	50.13
CDY46724	Canola	mitochondrion	52.89	49.88
Bra024111.1-P	Field mustard	mitochondrion	48.95	49.6
Bra019138.1-P	Field mustard	plastid	47.89	46.67
Bra010446.1-P	Field mustard	mitochondrion	46.84	45.76
CDY66012	Canola	mitochondrion	42.63	44.38
CDY57290	Canola	cytosol	39.74	43.64
CDY14193	Canola	mitochondrion	55.26	40.08
TraesCS3B01G478200.1	Wheat	mitochondrion	33.68	36.26
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	36.84	35.71
TraesCS3B01G418600.1	Wheat	golgi	33.95	33.51
TraesCS2B01G616400.1	Wheat	golgi	36.05	32.78
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.47	31.57
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	33.42	31.36
TraesCS1B01G026200.1	Wheat	golgi	31.84	30.71
TraesCS1B01G134300.1	Wheat	golgi	31.32	30.51
TraesCS3B01G046900.1	Wheat	golgi	31.32	30.13
TraesCS3B01G291600.1	Wheat	plastid	30.79	28.26
TraesCS3B01G047000.1	Wheat	plastid	29.74	27.9
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	32.37	26.51

Protein Annotations

EnsemblPlants:TraesCS2B01G452200.4	EnsemblPlantsGene:TraesCS2B01G452200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF13	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2B:+:646210162..646213404

Molecular Weight (calculated)

44162.9 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.363

Length

380 amino acids

Sequence
(BLAST)

001: MKAAPLPRTR AAASPRRRVW ILAVAALVSI VVVWAYHYPP QHYASPVSNW LPVEPDRELT DDERASRVVF GHMLSTLPVR SRGSKIAFMF LTPGNLPFEK
101: LWEKFFEGHE GRYTIYVHAS REKPEHVSRL FIGRDIHSDK VQWGQISMVD AERRLLANAL QDIDNQHFVL LSDSCVPLHN FDYVYDYLMG TNLSFIDSFY
201: DPGPHGNFRY SQNMLPEVRE SDFRKGSQWF SVKRQHALMT IADSLYYTKF KLYCKPGMEG GRNCYADEHY MPTLFNMMDP NGIANWSVTH VDWSEGKWHP
301: KAYRAQDVTY GLLKNITSID MSHHVTSDIK KVVTQNPCLW NGVKKPCYLF ARKFYPESMN NLINMCTFGR TLDLLTNWWI

Best Arabidopsis Sequence Match ( AT2G19160.1 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.