Factsheet for Bra013927.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 4
mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89388	Canola	cytosol	58.74	94.3
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	92.08	86.63
Bra019138.1-P	Field mustard	plastid	87.16	81.79
Bra010446.1-P	Field mustard	mitochondrion	83.33	78.41
Bra002743.1-P	Field mustard	golgi	76.5	71.98
Bra036729.1-P	Field mustard	mitochondrion	62.57	57.83
Bra010307.1-P	Field mustard	golgi, mitochondrion	62.3	56.86
Solyc07g008940.2.1	Tomato	golgi	59.56	55.47
Bra024111.1-P	Field mustard	mitochondrion	56.83	55.47
Bra012167.1-P	Field mustard	mitochondrion	60.38	55.39
PGSC0003DMT400073984	Potato	golgi	59.29	55.22
HORVU2Hr1G100480.3	Barley	cytosol	48.91	55.08
KRH19073	Soybean	golgi	58.74	54.71
Bra038843.1-P	Field mustard	mitochondrion	58.47	53.77
Zm00001d024348_P002	Maize	mitochondrion	54.1	53.51
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	58.74	53.35
KXG24737	Sorghum	golgi	54.37	51.96
Zm00001d026261_P001	Maize	golgi, mitochondrion	54.37	51.96
KRH02808	Soybean	golgi	59.02	51.43
EES12818	Sorghum	golgi	54.1	51.16
Bra011262.1-P	Field mustard	golgi	51.91	50.53
Zm00001d002382_P002	Maize	golgi, mitochondrion	53.28	50.39
TraesCS2D01G428700.2	Wheat	mitochondrion	51.64	49.74
TraesCS2B01G452200.4	Wheat	mitochondrion	51.09	49.21
TraesCS2A01G430900.2	Wheat	mitochondrion	50.82	48.19
Os08t0225400-01	Rice	cytosol, golgi	53.55	47.46
Bra006113.1-P	Field mustard	golgi	38.25	36.27
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	34.43	36.0
Bra008941.1-P	Field mustard	golgi	37.7	35.75
Bra006342.1-P	Field mustard	cytosol	33.88	35.73
Bra009874.1-P	Field mustard	golgi	37.43	35.49
Bra031273.1-P	Field mustard	golgi	36.61	35.17
Bra006114.1-P	Field mustard	golgi	34.15	34.92
Bra030418.1-P	Field mustard	golgi	36.61	34.45
Bra019894.1-P	Field mustard	golgi	34.97	33.95
Bra018450.1-P	Field mustard	golgi	34.43	31.19
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	35.25	31.16
Bra008639.1-P	Field mustard	golgi	33.88	30.62
Bra004303.1-P	Field mustard	golgi, vacuole	34.7	30.53
Bra008752.1-P	Field mustard	mitochondrion	30.33	30.33
Bra034487.1-P	Field mustard	mitochondrion	30.87	30.29
Bra033941.1-P	Field mustard	golgi	33.61	30.0
Bra004302.1-P	Field mustard	golgi	32.24	29.8
Bra031797.1-P	Field mustard	cytosol	25.41	27.51
Bra016802.1-P	Field mustard	golgi	27.87	27.13

Protein Annotations

EnsemblPlants:Bra013927.1	EnsemblPlants:Bra013927.1-P	EnsemblPlantsGene:Bra013927	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	PFAM:PF02485	TMHMM:TMhelix	UniParc:UPI0002546A1E	UniProt:M4DBR7	MapMan:35.1

Description

AT4G25870 (E=3e-156) | unknown protein

Coordinates

chrA01:-:8492735..8494726

Molecular Weight (calculated)

42397.5 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.385

Length

366 amino acids

Sequence
(BLAST)

001: MGEAQKTFQG PRHHTSLKKP LWVVLTVSVI SMLLISTHMF PRQGKRSSSD AFSAWLPAHV RKHTDEEIAA RAVVRDILKT PPSITENSKI AFLFLTPGTL
101: PFEKLWDEFL KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VNALEDPDNQ HFVLLSESCI PLHTFDYTYR YLLHSNVSFI
201: ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFS MLDPMGISNW SVTYVDWSER
301: RWHPKTYTAN EISLEFMKNV THGDELHWPC TWNGITRPCY LFARKFHPDA LDTLVNLFPN YTSTAS

Best Arabidopsis Sequence Match ( AT4G25870.1 )
(BLAST)

001: MGETQKILQG PRHHTSLKKP LWVVLTVSVT SMLLICTHMY PKHGKSSSCH GLYSTRGCED ALSKWLPVHV RKFTDEEIAA RAVVRDILRT PPFITNNSKI
101: AFLFLTPGTL PFEKLWDEFF KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VSALEDPDNQ HFVLVSESCI PLHTFDYTYR
201: YLLYSNVSFI ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFN MIDPMGISNW
301: SVTFVDWSER RWHPKTYGGN EISLEFMKNV TSEDMSVHVT SVGKHGDELH WPCTWNGIKR PCYLFARKFH PDTLDTLVNL FPNYTNTAV

Arabidopsis Description

At4g25870 [Source:UniProtKB/TrEMBL;Acc:Q9SVZ8]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.