Factsheet for Bra008639.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69465	Canola	golgi	99.75	99.75
Bra006342.1-P	Field mustard	cytosol	72.59	84.73
AT5G16170.1	Thale cress	golgi	81.48	80.29
CDY26504	Canola	cytosol	27.9	74.34
VIT_14s0006g02700.t01	Wine grape	cytosol	48.64	66.55
KRH46947	Soybean	cytosol	44.44	59.8
KRH01729	Soybean	cytosol	43.95	59.14
Bra019894.1-P	Field mustard	golgi	44.2	47.48
Bra008941.1-P	Field mustard	golgi	44.44	46.63
Bra006113.1-P	Field mustard	golgi	43.46	45.6
Bra006114.1-P	Field mustard	golgi	39.26	44.41
Bra009874.1-P	Field mustard	golgi	41.48	43.52
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	37.28	43.14
Bra030418.1-P	Field mustard	golgi	40.99	42.67
Bra031273.1-P	Field mustard	golgi	40.0	42.52
Bra033941.1-P	Field mustard	golgi	42.96	42.44
Bra004303.1-P	Field mustard	golgi, vacuole	42.96	41.83
Bra018450.1-P	Field mustard	golgi	41.48	41.58
Bra004302.1-P	Field mustard	golgi	39.75	40.66
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	41.48	40.58
Bra011262.1-P	Field mustard	golgi	31.85	34.31
Bra013927.1-P	Field mustard	golgi, plastid	30.62	33.88
Bra002743.1-P	Field mustard	golgi	32.35	33.68
Bra010307.1-P	Field mustard	golgi, mitochondrion	33.33	33.67
Bra024111.1-P	Field mustard	mitochondrion	31.11	33.6
Bra036729.1-P	Field mustard	mitochondrion	30.86	31.57
Bra012167.1-P	Field mustard	mitochondrion	30.86	31.33
Bra008752.1-P	Field mustard	mitochondrion	28.15	31.15
Bra019138.1-P	Field mustard	plastid	29.88	31.03
Bra038843.1-P	Field mustard	mitochondrion	30.37	30.9
Bra010446.1-P	Field mustard	mitochondrion	29.63	30.85
Bra016802.1-P	Field mustard	golgi	27.41	29.52
Bra034487.1-P	Field mustard	mitochondrion	27.16	29.49
Bra031797.1-P	Field mustard	cytosol	23.46	28.11

Protein Annotations

EnsemblPlants:Bra008639.1	EnsemblPlants:Bra008639.1-P	EnsemblPlantsGene:Bra008639	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF27	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544A65	UniProt:M4CWP2
MapMan:35.1	:	:	:	:	:

Description

AT5G16170 (E=6e-183) | unknown protein

Coordinates

chrA10:-:13190565..13192162

Molecular Weight (calculated)

47143.3 Da

IEP (calculated)

8.156

GRAVY (calculated)

-0.321

Length

405 amino acids

Sequence
(BLAST)

001: MGITDQKSKK EEEHLLISKP VRLILLHNGS HVLRSLFFII GFSIGLFLCL QLKAFHMSAP KTHQTLWSTL LFNHSTTMEI KRESQTRLLQ HNMTDQELFS
101: KISSLSSPSS SSSSSWFWRR HNNDEKIVVK VAFMFLTGGG LPLADLWDKF FEGHEGFYSI YVHTNPSFQE HYPETSVFYS RRIPSQAVYW GTSTMVDAER
201: RLLANALLDE SNQRFVLLSD SCIPLFNFTT IYDYLTGTNL SYIGSFDDPR TPGRGRYNPK MYPQINITHW RKGSQWFETT RELALHIIED TVYYKIFDQY
301: CKPPCYMDEH YIPTFVHMLH GEMSANRSLT WVDWSRAGPH PARFIWPDVT DEFLNRIRFT DKCPYYGKDS ENITSSKCVL FARKFTKETL EPLLRISPLV
401: LGFGP

Best Arabidopsis Sequence Match ( AT5G16170.1 )
(BLAST)

001: MSISDHKSKK EEEQYPMITK PLRLILLQKG SYVLSSLFFV FGFSVGLFLC LQLKAVHMST TTTQRQPLWS TLLFNHTVHT TEMDIKQELQ LQVLQHNMSD
101: QELFTKASSL SSPTSSLSSS SWLGRRHNND GKMAVKVAFM FMTGGRLPLA GLWEKFFEGH EGFYSIYVHT NPSFQDSFPE TSVFYSRRIP SQPVYWGTSS
201: MVDAEKRLLA NALLDESNQR FVLLSDSCIP LYNFTTIYDY LTGTNLSFIG SFDDPRKSGR GRYNHTMYPH INITHWRKGS QWFETTRELA LHIIEDTVYY
301: KIFDQHCKPP CYMDEHYIPT LVHMLHGEMS ANRTLTWVDW SKAGPHPGRF IWPDITDEFL NRIRFKEECV YFGRGGENVT TSKCFLFARK FTAETLEPLL
401: RISPIVLGFG P

Arabidopsis Description

At5g16170 [Source:UniProtKB/TrEMBL;Acc:Q4V3A2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.