Factsheet for Bra006114.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78440	Canola	cytosol	88.27	97.83
Bra006113.1-P	Field mustard	golgi	85.47	79.27
AT5G11730.1	Thale cress	golgi	84.08	77.98
Bra008941.1-P	Field mustard	golgi	82.68	76.68
Bra009874.1-P	Field mustard	golgi	71.79	66.58
EER93518	Sorghum	golgi, plasma membrane, plastid	60.34	55.96
GSMUA_Achr1P14240_001	Banana	golgi	55.03	55.03
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	58.94	53.96
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	58.94	53.83
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	58.66	53.57
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	54.19	53.15
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	59.22	53.0
GSMUA_Achr3P25730_001	Banana	golgi	52.23	52.09
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	57.82	51.49
Bra031273.1-P	Field mustard	golgi	54.75	51.44
Bra030418.1-P	Field mustard	golgi	55.59	51.16
EER93516	Sorghum	golgi	54.19	51.05
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	56.15	49.88
Zm00001d033890_P001	Maize	golgi	58.38	49.64
Os03t0731050-00	Rice	plastid	55.87	46.73
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	43.3	44.29
Bra006342.1-P	Field mustard	cytosol	42.74	44.09
Bra019894.1-P	Field mustard	golgi	44.13	41.91
Bra004303.1-P	Field mustard	golgi, vacuole	47.77	41.11
Bra018450.1-P	Field mustard	golgi	45.81	40.59
Bra033941.1-P	Field mustard	golgi	46.37	40.49
Bra004302.1-P	Field mustard	golgi	44.69	40.4
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	45.81	39.61
Bra008639.1-P	Field mustard	golgi	44.41	39.26
Bra013927.1-P	Field mustard	golgi, plastid	34.92	34.15
Bra011262.1-P	Field mustard	golgi	35.75	34.04
Bra024111.1-P	Field mustard	mitochondrion	34.92	33.33
Bra002743.1-P	Field mustard	golgi	35.75	32.9
Bra012167.1-P	Field mustard	mitochondrion	35.75	32.08
Bra036729.1-P	Field mustard	mitochondrion	34.64	31.31
Bra010307.1-P	Field mustard	golgi, mitochondrion	34.64	30.92
Bra010446.1-P	Field mustard	mitochondrion	33.24	30.59
Bra019138.1-P	Field mustard	plastid	32.96	30.26
Bra038843.1-P	Field mustard	mitochondrion	33.52	30.15
Bra034487.1-P	Field mustard	mitochondrion	30.73	29.49
Bra008752.1-P	Field mustard	mitochondrion	29.89	29.23
Bra031797.1-P	Field mustard	cytosol	25.7	27.22
Bra016802.1-P	Field mustard	golgi	28.49	27.13

Protein Annotations

EnsemblPlants:Bra006114.1	EnsemblPlants:Bra006114.1-P	EnsemblPlantsGene:Bra006114	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF54	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F961	UniProt:M4CPH6
MapMan:35.1	:	:	:	:	:

Description

AT5G11730 (E=5e-112) | unknown protein

Coordinates

chrA03:+:2078740..2081278

Molecular Weight (calculated)

41130.5 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.270

Length

358 amino acids

Sequence
(BLAST)

001: MQSMVVQLEE GKENGISVRT EQYKSFRPQL LLVLGLFLAG GVTIFIISTN KYTGLQSVVT TVTSSFVPRR EEEPDGLSKW IQPPGVLMHN MSDEELLWRA
101: SFWPRRKGYP FKRVPKIAFM FLTRGPLPLA SLWERFLKGH KGLYSVYIHP HPSYTAKFPA DSVFYQRQIP SQLAQWGRMN MCEAERRLLA NALLDISNEW
201: FVLVSESCIP LFNFTTIYTY LSQSKHSFMD AFDDNGPFGR GRYNDNMEPQ VPIAKWRKGS QWPACYSDEH YFPTMLTIEK PMALANRSVT WTDWSRGGSH
301: PATFGESDIT ENFFQKIFDG VNCTYNGRNT SMCYLFARKF APSALEPLLH IAPKIMGF

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.