Factsheet for Bra015963.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73016	Canola	mitochondrion	93.43	94.24
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	76.0	63.64
VIT_17s0000g03400.t01	Wine grape	cytosol	50.57	59.8
PGSC0003DMT400037735	Potato	cytosol	34.86	59.22
PGSC0003DMT400014396	Potato	cytosol	47.71	56.42
VIT_17s0000g03410.t01	Wine grape	cytosol	47.43	56.27
GSMUA_Achr6P09800_001	Banana	cytosol	44.0	55.4
TraesCS1D01G394500.1	Wheat	mitochondrion	44.29	53.08
HORVU1Hr1G085260.1	Barley	cytosol	34.57	50.42
KRH60391	Soybean	golgi, plastid	53.14	49.47
KRH41690	Soybean	golgi	50.57	47.58
PGSC0003DMT400037733	Potato	golgi	51.43	46.75
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	52.86	45.68
Solyc05g009120.2.1	Tomato	nucleus	50.86	45.64
Solyc05g009110.1.1	Tomato	golgi	49.14	44.68
Bra008941.1-P	Field mustard	golgi	48.0	43.52
Bra006114.1-P	Field mustard	golgi	44.29	43.3
Solyc12g036400.1.1	Tomato	extracellular	50.57	42.96
PGSC0003DMT400013770	Potato	golgi	50.0	42.48
Bra006342.1-P	Field mustard	cytosol	42.0	42.36
KRG90861	Soybean	golgi, plasma membrane	50.57	42.04
Bra006113.1-P	Field mustard	golgi	46.29	41.97
KRH35920	Soybean	golgi, plasma membrane	49.71	41.93
KRH38159	Soybean	golgi	52.29	41.88
Bra004303.1-P	Field mustard	golgi, vacuole	49.71	41.83
Bra033941.1-P	Field mustard	golgi	48.57	41.46
Bra004302.1-P	Field mustard	golgi	46.86	41.41
KRH39163	Soybean	golgi	52.29	40.58
KRH48513	Soybean	golgi	51.71	40.49
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	49.14	40.38
Bra031273.1-P	Field mustard	golgi	43.71	40.16
Bra019894.1-P	Field mustard	golgi	43.14	40.05
Bra030418.1-P	Field mustard	golgi	44.0	39.59
Bra009874.1-P	Field mustard	golgi	43.43	39.38
Bra018450.1-P	Field mustard	golgi	43.71	37.87
Os02t0327500-01	Rice	golgi	47.43	37.81
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	47.71	37.44
Bra008639.1-P	Field mustard	golgi	43.14	37.28
Zm00001d053393_P002	Maize	golgi, plastid	47.14	36.75
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	43.14	36.47
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	46.86	35.34
Bra013927.1-P	Field mustard	golgi, plastid	36.0	34.43
OQU84731	Sorghum	plastid	47.14	34.38
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	45.14	33.83
Bra011262.1-P	Field mustard	golgi	35.71	33.24
Bra036729.1-P	Field mustard	mitochondrion	37.14	32.83
Bra010307.1-P	Field mustard	golgi, mitochondrion	37.43	32.67
Bra010446.1-P	Field mustard	mitochondrion	36.29	32.65
Bra002743.1-P	Field mustard	golgi	36.29	32.65
Bra012167.1-P	Field mustard	mitochondrion	36.86	32.33
Bra024111.1-P	Field mustard	mitochondrion	34.57	32.27
Bra019138.1-P	Field mustard	plastid	35.43	31.79
Bra038843.1-P	Field mustard	mitochondrion	35.43	31.16
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	39.71	29.57
Bra008752.1-P	Field mustard	mitochondrion	30.86	29.51
Bra016802.1-P	Field mustard	golgi	31.43	29.26
Bra031797.1-P	Field mustard	cytosol	28.0	28.99
Bra034487.1-P	Field mustard	mitochondrion	30.86	28.95
CDX73017	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra015963.1	EnsemblPlants:Bra015963.1-P	EnsemblPlantsGene:Bra015963	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7
PFAM:PF02485	SEG:seg	UniParc:UPI0002541D9D	UniProt:M4DHI6	MapMan:35.1	:

Description

AT1G73810 (E=1e-145) | unknown protein

Coordinates

chrA07:-:20036125..20038216

Molecular Weight (calculated)

40923.0 Da

IEP (calculated)

10.080

GRAVY (calculated)

-0.516

Length

350 amino acids

Sequence
(BLAST)

001: MRNVSFSPQL FRLSSPSLSP QPQPENFVLV NETVAYDSDE GQKGHSMVEF EKVMHHNTTE EELMWRASKV QERPSTVKKK VAFMFLTRGK LPLAKLWERF
101: FNGHQGLFSV YVHTSNLSYV DDGIPERSPF YRRRIPSKEV KWGMVSMVEA ERRLIANALL DAANQRFVLL SETDIPLFNF STIYSYLINS QHSFVDLYDL
201: PGPAGRGRYN RRMSPVITRS KWRKGSQWFE IDREIAVAVV SDKTYFPLFK KHCRWGCYAD EHYLPTFVHV MFPGKNANRS LTWTDWSRRG PHPRKYTRRS
301: VRAELLTKLR NREGCVYNGK ESNNCYLFAR KFDDSCIDTL IHFAGRIMGF

Best Arabidopsis Sequence Match ( AT1G73810.1 )
(BLAST)

001: MKKSQETQED SLQQESRHQL HQIVISKILR SHRFFQNLVL YSFLIGFGFG LGFILNVHIR NVSFNPQLFR LSSLSPSSFS TPPLQPQPEI VVPLNDTVVA
101: TNDDDHEVGQ KGHYLMMPEN VVHNMTEEEL LLRASKIQEK TLKMTKKAAF MFLTRGKLPL AKLWERFFKG HEGLFSIYIH TSDPFYFDDH TPETSPFYRR
201: RIPSKEVGWG MVSMVAAERR LLANALLDAG NHRFVLLSES DIPLFNFSTI YSYLINSQHS YVDVYDLPGP AGRGRYNRRM SPVISRTNWR KGSQWFEIDR
301: EVALAVVSDT TYFPVFEKYC LWNCYADEHY LSTFVHAMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVTG EFLRRVRNRE QGCVYNGKKS EKCYLFARKF
401: DGSTLDKLLY FAHSVMGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T1]
SUBAcon: [golgi,nucleus,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.