Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- golgi 3
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35920 | Soybean | golgi, plasma membrane | 93.11 | 94.46 |
| KRH38159 | Soybean | golgi | 65.32 | 62.93 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 39.91 | 60.43 |
| KRH60391 | Soybean | golgi, plastid | 50.83 | 56.91 |
| KRH41690 | Soybean | golgi | 49.17 | 55.65 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 37.77 | 54.45 |
| KRH01729 | Soybean | cytosol | 38.0 | 53.16 |
| KRH46947 | Soybean | cytosol | 37.77 | 52.82 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 29.69 | 52.08 |
| KRH48513 | Soybean | golgi | 54.87 | 51.68 |
| CDX73016 | Canola | mitochondrion | 41.81 | 50.72 |
| Bra015963.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 42.04 | 50.57 |
| KRH39163 | Soybean | golgi | 53.21 | 49.67 |
| KRH48972 | Soybean | cytosol | 24.7 | 48.83 |
| KRH13326 | Soybean | cytosol | 24.23 | 47.89 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 47.03 | 47.37 |
| KRH05512 | Soybean | nucleus | 42.52 | 46.98 |
| KRH15500 | Soybean | nucleus | 41.81 | 46.32 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 41.33 | 44.96 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 41.09 | 44.7 |
| KRH26270 | Soybean | golgi | 40.38 | 44.39 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 40.86 | 43.65 |
| Os02t0327500-01 | Rice | golgi | 41.33 | 39.64 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 41.57 | 39.24 |
| OQU84731 | Sorghum | plastid | 44.18 | 38.75 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 42.52 | 38.58 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 40.86 | 38.31 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 42.04 | 37.9 |
| KRH16109 | Soybean | mitochondrion | 32.54 | 34.77 |
| KRH05009 | Soybean | golgi, mitochondrion | 31.83 | 34.01 |
| KRH19073 | Soybean | golgi | 31.35 | 33.59 |
| KRH56549 | Soybean | golgi | 28.74 | 33.24 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 37.05 | 33.19 |
| KRG93228 | Soybean | golgi | 28.03 | 31.89 |
| KRH02808 | Soybean | golgi | 31.35 | 31.43 |
| KRH11480 | Soybean | mitochondrion | 28.03 | 31.3 |
| KRH36494 | Soybean | mitochondrion | 28.5 | 28.5 |
| CDX73017 | Canola | cytosol | 0.71 | 21.43 |
Protein Annotations
| EntrezGene:100779041 | MapMan:35.1 | EMBL:ACUP02012648 | EnsemblPlantsGene:GLYMA_20G118100 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 |
| UniProt:K7N2Y3 | EnsemblPlants:KRG90861 | ProteinID:KRG90861 | ProteinID:KRG90861.1 | PFAM:PF02485 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF17 | TMHMM:TMhelix | UniParc:UPI000233DBEA | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:+:36094409..36097471
Molecular Weight (calculated)
48680.1 Da
IEP (calculated)
8.518
GRAVY (calculated)
-0.324
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGQNNQYSL NSVSKFFNAQ FHFIQFLSYI LILGFGISIG VIFSFYLKDC NFSLQFTQLS LSSFPRTPPL PPTTAKPEIS NQTQTQTQSQ IQTQTQMQTQ
101: TQIETQTQIE NSHVGLKEFL KPPPVVHDMD DEELLWRASV TAKIPDYPFD RVPKVAFLFL TRGPVFLAPL WEQFFKGHEG FYSIYVHSNP SYNGSRPESP
201: VFKGRRIPSK EVEWGNVNMI EAERRLLANA LLDISNQRFV LLSESCIPLF NFSTIYTYLM NSTQNYVMAF DDPSSVGRGR YSIQMLPKIS VNQWRKGSQW
301: FEMDRELAQE VVSDKKYFPV FQEYCKGSCY ADEHYLPTYV SIKFWEGNSN RSLTWVDWSK GGPHPTKFLR SEITVKFLES LRDQKCEYNG DSINVCFLFA
401: RKFAPSTVSK LTKIAPMVMH F
101: TQIETQTQIE NSHVGLKEFL KPPPVVHDMD DEELLWRASV TAKIPDYPFD RVPKVAFLFL TRGPVFLAPL WEQFFKGHEG FYSIYVHSNP SYNGSRPESP
201: VFKGRRIPSK EVEWGNVNMI EAERRLLANA LLDISNQRFV LLSESCIPLF NFSTIYTYLM NSTQNYVMAF DDPSSVGRGR YSIQMLPKIS VNQWRKGSQW
301: FEMDRELAQE VVSDKKYFPV FQEYCKGSCY ADEHYLPTYV SIKFWEGNSN RSLTWVDWSK GGPHPTKFLR SEITVKFLES LRDQKCEYNG DSINVCFLFA
401: RKFAPSTVSK LTKIAPMVMH F
001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.