Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- extracellular 4
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60391 | Soybean | golgi, plastid | 86.29 | 85.37 |
| PGSC0003DMT400037735 | Potato | cytosol | 37.9 | 68.45 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 46.77 | 62.59 |
| KRH48513 | Soybean | golgi | 69.89 | 58.17 |
| PGSC0003DMT400037733 | Potato | golgi | 59.41 | 57.4 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 44.89 | 57.19 |
| Solyc05g009120.2.1 | Tomato | nucleus | 59.95 | 57.18 |
| KRH39163 | Soybean | golgi | 69.09 | 56.98 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 35.75 | 55.42 |
| KRH46947 | Soybean | cytosol | 42.2 | 52.16 |
| KRH01729 | Soybean | cytosol | 41.94 | 51.83 |
| Solyc05g009110.1.1 | Tomato | golgi | 53.49 | 51.69 |
| CDX73016 | Canola | mitochondrion | 47.58 | 51.01 |
| Bra015963.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 47.58 | 50.57 |
| KRH35920 | Soybean | golgi, plasma membrane | 55.38 | 49.64 |
| KRG90861 | Soybean | golgi, plasma membrane | 55.65 | 49.17 |
| KRH13326 | Soybean | cytosol | 27.96 | 48.83 |
| KRH48972 | Soybean | cytosol | 27.96 | 48.83 |
| KRH38159 | Soybean | golgi | 55.65 | 47.37 |
| KRH05512 | Soybean | nucleus | 47.58 | 46.46 |
| KRH15500 | Soybean | nucleus | 46.77 | 45.79 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 50.0 | 44.5 |
| KRH26270 | Soybean | golgi | 45.43 | 44.13 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 45.43 | 43.67 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 45.97 | 43.4 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 44.89 | 43.15 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 47.31 | 39.46 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 47.58 | 39.42 |
| Os02t0327500-01 | Rice | golgi | 46.24 | 39.18 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 48.12 | 38.33 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 47.04 | 37.72 |
| OQU84731 | Sorghum | plastid | 48.66 | 37.71 |
| KRH19073 | Soybean | golgi | 35.48 | 33.59 |
| KRH16109 | Soybean | mitochondrion | 34.95 | 32.99 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 41.13 | 32.55 |
| KRH05009 | Soybean | golgi, mitochondrion | 34.41 | 32.49 |
| KRH02808 | Soybean | golgi | 34.95 | 30.95 |
| KRH11480 | Soybean | mitochondrion | 30.91 | 30.5 |
| KRH56549 | Soybean | golgi | 29.03 | 29.67 |
| KRG93228 | Soybean | golgi | 28.23 | 28.38 |
| KRH36494 | Soybean | mitochondrion | 30.65 | 27.08 |
| CDX73017 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02004777 | EnsemblPlantsGene:GLYMA_08G044500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | UniProt:I1KQ97 |
| EnsemblPlants:KRH41690 | ProteinID:KRH41690 | ProteinID:KRH41690.1 | PFAM:PF02485 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF7 |
| TMHMM:TMhelix | UniParc:UPI000296B1EC | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:3516841..3520870
Molecular Weight (calculated)
43413.8 Da
IEP (calculated)
10.469
GRAVY (calculated)
-0.103
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSFFFSHVL VFASGLLIGI TLITFSFKNL SLNFQFHQLF LPSLSPHSDP ILISALNNQT KVTIHSILRP TKAAMHDMTE EELLWRASMV PMIKELPYNH
101: TPKVAFMFLT KGSVLLAPLW ERFFKGNEAF YSIYVHSLPS FNDTVPQTSV FHGRRIPSKE VRWGDFNIVG AERRLLANAL LDFSNQHFVL LSESCIPLFN
201: FSTIYNYLMN STKTFVEAYD MPGAVGRGRY SPRMRPLVNL SQWKKGSQWF QIDRALAIDI VSDQQYFPLF NKYCKNRCYG DEHYLPTFVS IRFWKRNSNR
301: TLTFVDWSRG GAHPARFMRQ HVTVDFLKRL RHGRTCLYNG KTTNICHLFA RKFMPQALDR LLRFAPRIMQ FN
101: TPKVAFMFLT KGSVLLAPLW ERFFKGNEAF YSIYVHSLPS FNDTVPQTSV FHGRRIPSKE VRWGDFNIVG AERRLLANAL LDFSNQHFVL LSESCIPLFN
201: FSTIYNYLMN STKTFVEAYD MPGAVGRGRY SPRMRPLVNL SQWKKGSQWF QIDRALAIDI VSDQQYFPLF NKYCKNRCYG DEHYLPTFVS IRFWKRNSNR
301: TLTFVDWSRG GAHPARFMRQ HVTVDFLKRL RHGRTCLYNG KTTNICHLFA RKFMPQALDR LLRFAPRIMQ FN
001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.