CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 4
mitochondrion 2
golgi 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41690	Soybean	golgi	85.37	86.29
PGSC0003DMT400037735	Potato	cytosol	38.3	69.9
GSMUA_Achr6P09800_001	Banana	cytosol	47.07	63.67
KRH48513	Soybean	golgi	71.01	59.73
KRH39163	Soybean	golgi	70.74	58.98
Solyc05g009120.2.1	Tomato	nucleus	60.64	58.46
PGSC0003DMT400037733	Potato	golgi	59.84	58.44
TraesCS1D01G394500.1	Wheat	mitochondrion	44.68	57.53
HORVU1Hr1G085260.1	Barley	cytosol	35.11	55.0
Solyc05g009110.1.1	Tomato	golgi	55.32	54.03
KRH46947	Soybean	cytosol	43.09	53.82
KRH01729	Soybean	cytosol	42.82	53.49
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	49.47	53.14
CDX73016	Canola	mitochondrion	48.67	52.74
KRH35920	Soybean	golgi, plasma membrane	56.65	51.33
KRG90861	Soybean	golgi, plasma membrane	56.91	50.83
KRH38159	Soybean	golgi	56.38	48.51
KRH48972	Soybean	cytosol	27.39	48.36
KRH13326	Soybean	cytosol	27.39	48.36
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	52.13	46.89
KRH05512	Soybean	nucleus	46.81	46.19
KRH26270	Soybean	golgi	46.81	45.95
KRH15500	Soybean	nucleus	46.01	45.53
KRH06031	Soybean	golgi, plasma membrane, plastid	46.81	44.67
KRH44223	Soybean	cytosol, golgi, plasma membrane	45.21	43.93
KRH47176	Soybean	cytosol, golgi, plasma membrane	45.21	43.93
Os02t0327500-01	Rice	golgi	47.07	40.32
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	48.94	39.4
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	48.4	39.22
Zm00001d053393_P002	Maize	golgi, plastid	46.81	39.2
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	45.74	38.56
OQU84731	Sorghum	plastid	47.61	37.29
KRH19073	Soybean	golgi	35.9	34.35
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	42.29	33.83
KRH16109	Soybean	mitochondrion	35.37	33.76
KRH05009	Soybean	golgi, mitochondrion	35.37	33.76
KRH02808	Soybean	golgi	35.37	31.67
KRH11480	Soybean	mitochondrion	31.12	31.03
KRH56549	Soybean	golgi	29.79	30.77
KRG93228	Soybean	golgi	28.99	29.46
KRH36494	Soybean	mitochondrion	30.85	27.55
CDX73017	Canola	cytosol	0.8	21.43

Protein Annotations

EntrezGene:100815747	MapMan:35.1	EMBL:ACUP02003364	EnsemblPlantsGene:GLYMA_05G237300	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
UniProt:K7KRJ6	EnsemblPlants:KRH60391	ProteinID:KRH60391	ProteinID:KRH60391.1	PFAM:PF02485	PANTHER:PTHR31042
PANTHER:PTHR31042:SF7	TMHMM:TMhelix	UniParc:UPI00023393B9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:41365082..41368232

Molecular Weight (calculated)

43801.0 Da

IEP (calculated)

10.489

GRAVY (calculated)

-0.270

Length

376 amino acids

Sequence
(BLAST)

001: MKNNQQERSL AAARLLSHAQ SHMFSFFVSH VLVFASGLLI GITLTTFSFK NLSLNFLPSL STPIPISTLN NQTQVTKAMH DMTEEELLWR ASMVPTIKEM
101: PYKHTPKVAF MFLTKGPVLL GPLWERFFKG NEGFYSIYVH SHPSFNDTVP QSSVFHRRRI PSKEVRWGDF NIVGAERRLL ANALLDFSNQ RFVLLSESCI
201: PLFNFSTIYN YLMNSTETFV EAYDMPGAVG RGRYSPRMRP LVNLSQWRKG SQWFQIDRAL AIEIVSDQQY FPVFKKYCRN GCYGDEHYLP TFVSIMFWKR
301: NSNRTLTWVD WSRGGPHPAR FMRQDVTIDF LKRLRHGRTC QYNGKSTNIC HLFARKFNPQ GLDRLLRFAP RIMQFN

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.