CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 4
plastid 1
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02808	Soybean	golgi	96.95	90.71
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	77.35	75.43
PGSC0003DMT400073984	Potato	golgi	73.54	73.54
Solyc07g008940.2.1	Tomato	golgi	73.28	73.28
HORVU2Hr1G100480.3	Barley	cytosol	55.22	66.77
AT2G19160.1	Thale cress	golgi, mitochondrion	65.9	65.74
AT4G30060.1	Thale cress	golgi	66.67	65.34
Bra036729.1-P	Field mustard	mitochondrion	65.65	65.15
CDY66853	Canola	mitochondrion	65.39	64.9
Bra010307.1-P	Field mustard	golgi, mitochondrion	66.16	64.84
CDY03552	Canola	golgi, mitochondrion	65.9	64.59
Zm00001d026261_P001	Maize	golgi, mitochondrion	62.85	64.49
EES12818	Sorghum	golgi	63.36	64.34
CDY03361	Canola	mitochondrion	64.63	64.3
CDX89388	Canola	cytosol	37.15	64.04
CDX83505	Canola	mitochondrion	64.38	63.57
CDY12850	Canola	mitochondrion	64.38	63.57
Zm00001d002382_P002	Maize	golgi, mitochondrion	62.6	63.57
Bra012167.1-P	Field mustard	mitochondrion	64.38	63.41
CDY01412	Canola	mitochondrion	64.38	63.41
KRH05009	Soybean	golgi, mitochondrion	62.85	62.69
KRH16109	Soybean	mitochondrion	62.85	62.69
KXG24737	Sorghum	golgi	61.07	62.66
TraesCS2D01G428700.2	Wheat	mitochondrion	60.56	62.63
CDY46724	Canola	mitochondrion	64.12	62.53
CDY30178	Canola	mitochondrion	63.87	62.44
CDY51089	Canola	golgi, mitochondrion	62.34	62.03
AT5G57270.5	Thale cress	golgi	61.07	61.86
TraesCS2B01G452200.4	Wheat	mitochondrion	59.8	61.84
Bra024111.1-P	Field mustard	mitochondrion	58.78	61.6
Zm00001d024348_P002	Maize	mitochondrion	57.76	61.35
Bra038843.1-P	Field mustard	mitochondrion	62.09	61.31
CDY38285	Canola	golgi	60.56	61.18
CDX82625	Canola	mitochondrion	61.32	61.01
CDY11878	Canola	golgi	60.31	60.93
Bra002743.1-P	Field mustard	golgi	60.31	60.93
CDX88613	Canola	golgi	60.31	60.93
TraesCS2A01G430900.2	Wheat	mitochondrion	59.8	60.88
CDY25922	Canola	golgi	60.05	60.67
Bra013927.1-P	Field mustard	golgi, plastid	54.71	58.74
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	58.02	58.61
CDX94406	Canola	golgi	56.23	58.31
CDY49466	Canola	cytosol	37.91	57.98
Os08t0225400-01	Rice	cytosol, golgi	60.56	57.63
CDX92736	Canola	mitochondrion	55.47	57.52
CDY42774	Canola	mitochondrion	54.96	56.99
Bra010446.1-P	Field mustard	mitochondrion	52.93	53.47
Bra019138.1-P	Field mustard	plastid	52.93	53.33
CDY66012	Canola	mitochondrion	48.85	52.6
CDY14193	Canola	mitochondrion	66.16	49.62
CDY57290	Canola	cytosol	41.48	47.11
KRH48972	Soybean	cytosol	22.39	41.31
KRH13326	Soybean	cytosol	22.14	40.85
KRH01729	Soybean	cytosol	30.79	40.2
KRH46947	Soybean	cytosol	30.03	39.2
KRH05512	Soybean	nucleus	35.37	36.48
KRH15500	Soybean	nucleus	35.11	36.32
KRH60391	Soybean	golgi, plastid	34.35	35.9
KRH41690	Soybean	golgi	33.59	35.48
KRH56549	Soybean	golgi	32.82	35.44
KRG93228	Soybean	golgi	33.08	35.14
KRH47176	Soybean	cytosol, golgi, plasma membrane	34.35	34.88
KRH44223	Soybean	cytosol, golgi, plasma membrane	34.1	34.63
KRH06031	Soybean	golgi, plasma membrane, plastid	33.84	33.76
KRH26270	Soybean	golgi	32.82	33.68
KRH11480	Soybean	mitochondrion	31.3	32.63
KRH35920	Soybean	golgi, plasma membrane	34.1	32.29
KRG90861	Soybean	golgi, plasma membrane	33.59	31.35
KRH38159	Soybean	golgi	34.86	31.35
KRH48513	Soybean	golgi	35.11	30.87
KRH39163	Soybean	golgi	34.1	29.71
KRH36494	Soybean	mitochondrion	31.3	29.22

Protein Annotations

EntrezGene:100817202	MapMan:35.1	EMBL:ACUP02008168	EnsemblPlantsGene:GLYMA_13G099700	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
UniProt:I1LVM9	EnsemblPlants:KRH19073	ProteinID:KRH19073	ProteinID:KRH19073.1	ProteinID:KRH19074.1	ProteinID:KRH19075.1
PFAM:PF02485	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1	TMHMM:TMhelix	UniParc:UPI000233B0E6	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:21507274..21514703

Molecular Weight (calculated)

45505.9 Da

IEP (calculated)

8.504

GRAVY (calculated)

-0.250

Length

393 amino acids

Sequence
(BLAST)

001: MKAEKVWRLG SMGDMQILPG SRHRPPMKKP MWIIVLVLFV CVFLICAYIY PPQSSSACYV FSSKGCKGFV DWLPPMPARE YTDEEIASRV VIKDILNSPA
101: IVSKNSKIAF MFLSPGSLPF ERLWDKFFQG HEGKFSVYVH ASKTKPVHVS RYFVNRDIRS DQVIWGKISM VDAERRLLAN ALQDTDNQQF VLLSDSCVPL
201: YDFDYIYNYL MYTNISFVDC FKDPGPHGNG RYSDRMLPEV EVKDFRKGAQ WFAMKRQHAI IVMADNLYYS KFRSYCQPGL EGKNCIADEH YLPTFFQMVD
301: PGGIANWSLT HVDWSERKWH PKSYRAQDVT YELLKNITSI DVSVHVTSDE KKEVQSWPCL WNGIQKPCYL FARKFTPETM DSLLRLLANY SGP

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.