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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036729.1-P Field mustard mitochondrion 99.49 99.49
CDY03361 Canola mitochondrion 98.99 99.24
CDY12850 Canola mitochondrion 87.88 87.44
CDX83505 Canola mitochondrion 87.88 87.44
CDY01412 Canola mitochondrion 87.63 86.97
AT2G19160.1 Thale cress golgi, mitochondrion 85.86 86.29
CDX82625 Canola mitochondrion 82.83 83.04
CDY51089 Canola golgi, mitochondrion 82.07 82.28
CDY03552 Canola golgi, mitochondrion 77.02 76.06
CDY30178 Canola mitochondrion 75.76 74.63
CDY46724 Canola mitochondrion 75.51 74.19
CDX89388 Canola cytosol 38.38 66.67
KRH19073 Soybean golgi 64.9 65.39
Solyc07g008940.2.1 Tomato golgi 61.87 62.34
PGSC0003DMT400073984 Potato golgi 61.36 61.83
CDY38285 Canola golgi 60.35 61.44
CDX88613 Canola golgi 60.35 61.44
KRH02808 Soybean golgi 65.15 61.43
VIT_11s0103g00490.t01 Wine grape golgi, plastid 62.37 61.29
CDY25922 Canola golgi 60.1 61.18
CDY11878 Canola golgi 60.1 61.18
CDX94406 Canola golgi 58.33 60.95
CDY49466 Canola cytosol 39.14 60.31
CDY42774 Canola mitochondrion 57.07 59.63
HORVU2Hr1G100480.3 Barley cytosol 48.48 59.08
CDX92736 Canola mitochondrion 56.31 58.84
CDY14193 Canola mitochondrion 77.78 58.78
KXG24737 Sorghum golgi 55.05 56.92
Zm00001d026261_P001 Maize golgi, mitochondrion 54.8 56.66
CDX68738 Canola golgi 53.79 56.65
CDY28259 Canola golgi 53.79 56.65
EES12818 Sorghum golgi 55.05 56.33
Zm00001d024348_P002 Maize mitochondrion 52.53 56.22
Zm00001d002382_P002 Maize golgi, mitochondrion 54.55 55.81
TraesCS2B01G452200.4 Wheat mitochondrion 52.78 55.0
TraesCS2D01G428700.2 Wheat mitochondrion 52.53 54.74
CDY66012 Canola mitochondrion 49.75 53.97
TraesCS2A01G430900.2 Wheat mitochondrion 52.27 53.63
Os08t0225400-01 Rice cytosol, golgi 53.28 51.09
CDY57290 Canola cytosol 43.69 50.0
CDX80552 Canola cytosol 14.65 37.91
CDX78440 Canola cytosol 30.81 37.77
CDX73016 Canola mitochondrion 32.83 37.46
CDX70417 Canola cytosol 26.52 35.0
CDY43927 Canola golgi 34.34 34.96
CDX87842 Canola golgi 34.34 34.96
CDX97141 Canola golgi 33.84 34.72
CDX97139 Canola golgi 33.84 34.72
CDX69735 Canola golgi 33.33 34.2
CDY19328 Canola golgi, mitochondrion 32.32 33.86
CDX78439 Canola golgi 34.09 33.67
CDX69574 Canola mitochondrion 30.81 33.33
CDY51451 Canola golgi 32.07 33.33
CDY08638 Canola mitochondrion 31.82 33.25
CDY24895 Canola mitochondrion 31.31 33.24
CDY31036 Canola golgi 31.57 33.16
CDX88209 Canola golgi 29.29 33.14
CDX93443 Canola golgi 32.07 33.07
CDY09869 Canola mitochondrion 30.56 33.06
CDX94911 Canola golgi 32.07 32.99
CDX97140 Canola golgi 34.09 32.93
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 31.57 32.81
CDY20644 Canola golgi 31.82 32.31
CDY34605 Canola golgi 30.81 32.28
CDY31228 Canola golgi 29.55 31.62
CDY21023 Canola golgi 29.8 31.38
CDX96026 Canola golgi 31.31 31.31
CDY20597 Canola golgi 26.77 31.18
CDX78674 Canola cytosol, golgi, plasma membrane 31.57 31.02
CDX69465 Canola golgi 31.57 30.86
CDX70676 Canola cytosol, golgi, nucleus 31.31 30.85
CDX96025 Canola golgi, vacuole 31.82 30.29
CDY26504 Canola cytosol 11.62 30.26
CDX81507 Canola golgi 31.31 30.24
CDX70416 Canola golgi 33.33 30.21
CDY44904 Canola golgi 31.06 30.0
CDY59035 Canola golgi 31.82 29.93
CDY70337 Canola golgi 25.25 26.81
CDY66259 Canola cytosol 27.27 25.12
CDX97918 Canola golgi 30.81 19.33
CDX73017 Canola cytosol 0.51 14.29
Protein Annotations
EnsemblPlants:CDY66853EnsemblPlantsGene:GSBRNA2T00056705001GO:A0A078JGZ6GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF1PFAM:PF02485ProteinID:CDY66853ProteinID:CDY66853.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EED91BUniProt:A0A078JGZ6MapMan:35.1:::
Description
BnaA09g52890DBnaA09g52890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGZ6]
Coordinates
chrLK035521:+:10026..13394
Molecular Weight (calculated)
45807.9 Da
IEP (calculated)
8.375
GRAVY (calculated)
-0.330
Length
396 amino acids
Sequence
(BLAST)
001: MKAVKGWLLG RTSYTQSLPG ARHHRTPPTK KRVWIIAVVS LITMFVIGAY MFPHHRNSAC YMFSSNGCKA LTDWLPPSPR EFSDDEIAAR VVISEMLSSP
101: RVIEKTSKIA FMFLTPGTLP FEKLWDLFLE GHEGKFSVYI HASKDTPVHT SRYFLNREIR SDEVIWGRIS MIDAERRLLT NALRDPENQQ FVLLSDSCVP
201: LRSFEYMYNY MMYSNVSYVD CFDDPGPHGT GRHMDHMLPE IPKEDFRKGA QWFSMKRQHA VITVADSLYY SKFRDYCRPG VESNKNCIAD EHYLPTFFHM
301: LDPGGIANWT VTYVDWSEKK WHPRTYLPND VTHELLKNLT SIDAVSRVTS EGTGEVTWTP CMWNGIKRPC YLFGRKFHAA TLNKLIDLFS NYTSMA
Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)
001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
Arabidopsis Description
At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.