Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008941.1-P Field mustard golgi 99.22 99.22
CDX97139 Canola golgi 96.63 96.63
CDX97141 Canola golgi 96.11 96.11
CDX97140 Canola golgi 94.3 88.78
AT5G11730.1 Thale cress golgi 88.08 88.08
CDX78440 Canola cytosol 69.95 83.59
CDX78439 Canola golgi 83.42 80.3
CDX70417 Canola cytosol 61.4 79.0
CDX80552 Canola cytosol 30.05 75.82
CDX70416 Canola golgi 82.64 73.0
CDX88209 Canola golgi 64.77 71.43
EER93518 Sorghum golgi, plasma membrane, plastid 61.14 61.14
GSMUA_Achr1P14240_001 Banana golgi 55.18 59.5
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 55.96 59.18
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 59.84 59.08
GSMUA_Achr3P25730_001 Banana golgi 54.92 59.05
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 59.59 58.67
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 59.33 58.42
CDY51451 Canola golgi 57.25 58.01
HORVU4Hr1G010270.2 Barley golgi, peroxisome 59.84 57.75
CDY43927 Canola golgi 58.03 57.58
CDX87842 Canola golgi 57.51 57.07
EER93517 Sorghum golgi, mitochondrion, plasma membrane 59.33 56.97
EER93516 Sorghum golgi 55.96 56.84
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 55.7 56.43
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 58.03 55.58
Zm00001d033890_P001 Maize golgi 60.36 55.34
Os03t0731050-00 Rice plastid 58.55 52.8
CDX73016 Canola mitochondrion 42.49 47.26
CDY31036 Canola golgi 45.34 46.42
CDX93443 Canola golgi 45.6 45.83
CDX94911 Canola golgi 45.6 45.71
CDY19328 Canola golgi, mitochondrion 44.04 44.97
CDY20644 Canola golgi 45.08 44.62
CDX96025 Canola golgi, vacuole 47.67 44.23
CDX69465 Canola golgi 46.37 44.2
CDX81507 Canola golgi 46.63 43.9
CDY44904 Canola golgi 46.63 43.9
CDX78674 Canola cytosol, golgi, plasma membrane 45.34 43.42
CDY59035 Canola golgi 47.15 43.23
CDX70676 Canola cytosol, golgi, nucleus 44.82 43.03
CDY20597 Canola golgi 37.82 42.94
CDX89388 Canola cytosol 24.87 42.11
CDX96026 Canola golgi 43.01 41.92
CDY26504 Canola cytosol 16.32 41.45
CDY49466 Canola cytosol 24.87 37.35
CDX68738 Canola golgi 36.27 37.23
CDY28259 Canola golgi 36.27 37.23
CDX92736 Canola mitochondrion 35.75 36.41
CDX94406 Canola golgi 35.49 36.15
CDY42774 Canola mitochondrion 35.49 36.15
CDY11878 Canola golgi 36.27 35.99
CDX88613 Canola golgi 36.27 35.99
CDY70337 Canola golgi 34.72 35.92
CDY38285 Canola golgi 35.23 34.96
CDY25922 Canola golgi 34.97 34.7
CDX83505 Canola mitochondrion 35.49 34.42
CDY12850 Canola mitochondrion 35.49 34.42
CDY01412 Canola mitochondrion 35.49 34.34
CDX82625 Canola mitochondrion 34.72 33.92
CDY03361 Canola mitochondrion 34.46 33.67
CDY66853 Canola mitochondrion 34.2 33.33
CDY46724 Canola mitochondrion 34.72 33.25
CDY03552 Canola golgi, mitochondrion 34.2 32.92
CDY51089 Canola golgi, mitochondrion 33.68 32.91
CDY30178 Canola mitochondrion 34.2 32.84
CDX69574 Canola mitochondrion 30.31 31.97
CDY09869 Canola mitochondrion 30.05 31.69
CDY24895 Canola mitochondrion 30.57 31.64
CDY66012 Canola mitochondrion 29.79 31.51
CDY08638 Canola mitochondrion 30.83 31.4
CDY57290 Canola cytosol 27.98 31.21
CDY31228 Canola golgi 29.02 30.27
CDY34605 Canola golgi 29.02 29.63
CDY21023 Canola golgi 28.5 29.26
CDY14193 Canola mitochondrion 34.72 25.57
CDX97918 Canola golgi 41.71 25.52
CDY66259 Canola cytosol 25.65 23.02
CDX73017 Canola cytosol 0.52 14.29
Protein Annotations
EnsemblPlants:CDX69735EnsemblPlantsGene:GSBRNA2T00135770001GO:A0A078BYA1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF54PFAM:PF02485ProteinID:CDX69735ProteinID:CDX69735.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EEE5CEMapMan:35.1::::
Description
BnaA10g20840D
Coordinates
chrLK031790:-:1564664..1566640
Molecular Weight (calculated)
44379.0 Da
IEP (calculated)
9.575
GRAVY (calculated)
-0.136
Length
386 amino acids
Sequence
(BLAST)
001: MQTRVIQMEE GKDNGILIRS VKSKPFPAKL LLILGLFLAF ALTVFVISVS TIKYTGLQNV VTTVTSGFVT CREDEPSSLS KWIQPPAVLM HNMTDEELLW
101: RASFWPRRKE YPFQRVPKIA FMFLTKGPLP LALLWERFLK GHKGLYSVYV HPHPSFTAKF PAGSVFHQRQ IPSQVAEWGR MTMCDAEKRL LANALLDISN
201: EWFVLVSESC IPLFNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNDNME PEVPITKWRK GSQWFEINRE LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPM ALANRSLTWV DWSRGGPHPA TFGRSDITEK FFEKILDGKN CVYNGRNTSM CYLFARKFAP SALESLLHIA PKILGY
Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.