CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 3
mitochondrion 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004303.1-P	Field mustard	golgi, vacuole	100.0	100.0
CDY59035	Canola	golgi	97.6	96.44
CDX81507	Canola	golgi	87.02	88.29
CDY44904	Canola	golgi	86.54	87.8
AT1G68390.1	Thale cress	plastid	83.17	84.8
CDX96026	Canola	golgi	61.54	64.65
CDY70337	Canola	golgi	51.68	57.64
CDX73016	Canola	mitochondrion	42.31	50.72
CDX78440	Canola	cytosol	38.94	50.15
CDY31036	Canola	golgi	44.23	48.81
CDX94911	Canola	golgi	44.95	48.57
CDY51451	Canola	golgi	44.47	48.56
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	44.23	48.29
CDX97139	Canola	golgi	44.47	47.93
CDX93443	Canola	golgi	44.23	47.92
CDX97141	Canola	golgi	44.23	47.67
CDX69735	Canola	golgi	44.23	47.67
CDY20644	Canola	golgi	44.47	47.44
CDX87842	Canola	golgi	44.23	47.3
CDY43927	Canola	golgi	43.75	46.79
CDX70417	Canola	cytosol	33.65	46.67
CDY19328	Canola	golgi, mitochondrion	41.59	45.77
CDX80552	Canola	cytosol	16.59	45.1
CDX78439	Canola	golgi	43.03	44.64
CDX97140	Canola	golgi	43.75	44.39
CDX70676	Canola	cytosol, golgi, nucleus	42.79	44.28
CDX78674	Canola	cytosol, golgi, plasma membrane	42.07	43.42
CDX69465	Canola	golgi	41.83	42.96
CDX88209	Canola	golgi	35.1	41.71
CDY20597	Canola	golgi	33.89	41.47
CDX70416	Canola	golgi	42.79	40.73
CDY26504	Canola	cytosol	14.42	39.47
CDX89388	Canola	cytosol	21.15	38.6
CDY49466	Canola	cytosol	22.84	36.97
CDY28259	Canola	golgi	32.45	35.9
CDX68738	Canola	golgi	32.45	35.9
CDX92736	Canola	mitochondrion	32.45	35.62
CDY42774	Canola	mitochondrion	32.21	35.36
CDX94406	Canola	golgi	31.49	34.56
CDY03552	Canola	golgi, mitochondrion	32.69	33.92
CDY46724	Canola	mitochondrion	32.69	33.75
CDY30178	Canola	mitochondrion	32.21	33.33
CDY11878	Canola	golgi	30.29	32.39
CDX88613	Canola	golgi	30.29	32.39
CDY38285	Canola	golgi	30.29	32.39
CDY12850	Canola	mitochondrion	30.77	32.16
CDX83505	Canola	mitochondrion	30.77	32.16
CDY03361	Canola	mitochondrion	30.53	32.15
CDY25922	Canola	golgi	30.05	32.13
CDY01412	Canola	mitochondrion	30.77	32.08
CDY66853	Canola	mitochondrion	30.29	31.82
CDY51089	Canola	golgi, mitochondrion	30.05	31.65
CDY66012	Canola	mitochondrion	27.64	31.51
CDY57290	Canola	cytosol	26.2	31.5
CDX82625	Canola	mitochondrion	29.81	31.39
CDY34605	Canola	golgi	28.12	30.95
CDX69574	Canola	mitochondrion	27.16	30.87
CDY09869	Canola	mitochondrion	27.16	30.87
CDY08638	Canola	mitochondrion	28.12	30.87
CDY24895	Canola	mitochondrion	27.64	30.83
CDY21023	Canola	golgi	27.64	30.59
CDY31228	Canola	golgi	26.92	30.27
CDX97918	Canola	golgi	39.42	25.99
CDY14193	Canola	mitochondrion	32.69	25.95
CDY66259	Canola	cytosol	23.56	22.79
CDX73017	Canola	cytosol	0.72	21.43

Protein Annotations

EnsemblPlants:CDX96025	EnsemblPlantsGene:GSBRNA2T00102058001	GO:A0A078E2G8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF56
PFAM:PF02485	ProteinID:CDX96025	ProteinID:CDX96025.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002541742
MapMan:35.1	:	:	:	:	:

Description

BnaA07g27060D

Coordinates

chrLK031892:+:693041..696104

Molecular Weight (calculated)

48116.0 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.378

Length

416 amino acids

Sequence
(BLAST)

001: MKNQKEQNSS LSSSSPSLVA KLLNAQYHQF LNLLSYSLIL CCGIIIGILL HSSLQDISSI SSPNIQRISQ LFLVSSIPSP PHPSPSPPPP SPPPPSQPEH
101: IGLEQFLRPP KKIMHDMEEE ELLWRASMTP KIKNYPFRRT PKVAFMFLTK GHLPLAPLWE RFFRGHEGLF SIYVHSYPSY NQTDPEGSVF HGRQIPSKRV
201: DWGYVNMVEA EQRLLANALL DISNERFVLL SESCIPLFNF TTVYSYLTKS IQTHVQSYDE LGGVGRGRYS PEMKPRIQLR HWRKGSQWFE LDRAMALEII
301: SDKIYWPLFY RYCHHGCYTD EHYIPTLLNI KSSLGRRNSN RTLTWVDWSK GGPHPNRFIR YEVTEEFLVK LRSGGEENRQ CYHNGEKTNI CYLFARKFLP
401: TALGRLLRLA PTVLYF

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.