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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19328 Canola golgi, mitochondrion 80.88 72.75
AT1G10880.1 Thale cress golgi 82.06 72.28
VIT_01s0011g03840.t01 Wine grape cytosol 49.71 57.09
CDX80552 Canola cytosol 23.53 52.29
GSMUA_Achr8P31730_001 Banana cytosol 37.94 47.08
Solyc05g009130.2.1 Tomato golgi 51.18 46.4
CDX97918 Canola golgi 77.35 41.68
CDX78440 Canola cytosol 37.35 39.32
CDY26504 Canola cytosol 17.06 38.16
CDX78674 Canola cytosol, golgi, plasma membrane 45.0 37.97
CDX69735 Canola golgi 42.94 37.82
CDX97141 Canola golgi 42.94 37.82
CDX97139 Canola golgi 42.94 37.82
CDX73016 Canola mitochondrion 38.53 37.75
CDX70676 Canola cytosol, golgi, nucleus 44.41 37.56
CDY31036 Canola golgi 40.29 36.34
CDX70417 Canola cytosol 32.06 36.33
CDX69465 Canola golgi 42.94 36.05
CDX78439 Canola golgi 42.35 35.91
CDY43927 Canola golgi 40.88 35.73
CDX88209 Canola golgi 36.76 35.71
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 40.0 35.7
CDY51451 Canola golgi 40.0 35.7
CDX87842 Canola golgi 40.59 35.48
CDX93443 Canola golgi 40.0 35.42
CDX94911 Canola golgi 40.0 35.32
CDY44904 Canola golgi 42.06 34.88
CDY20644 Canola golgi 40.0 34.87
CDX81507 Canola golgi 41.76 34.63
CDY59035 Canola golgi 42.65 34.44
CDX97140 Canola golgi 41.47 34.39
CDX96025 Canola golgi, vacuole 41.47 33.89
CDX96026 Canola golgi 39.12 33.59
CDX70416 Canola golgi 42.06 32.72
CDY49466 Canola cytosol 24.41 32.3
CDY28259 Canola golgi 34.71 31.38
CDX68738 Canola golgi 34.71 31.38
CDX89388 Canola cytosol 20.59 30.7
CDY70337 Canola golgi 30.88 28.15
CDX92736 Canola mitochondrion 31.18 27.97
CDY42774 Canola mitochondrion 31.18 27.97
CDY66012 Canola mitochondrion 30.0 27.95
CDY11878 Canola golgi 31.76 27.76
CDX88613 Canola golgi 31.76 27.76
CDX94406 Canola golgi 30.59 27.44
CDY25922 Canola golgi 31.18 27.25
CDY38285 Canola golgi 31.18 27.25
CDY03361 Canola mitochondrion 31.47 27.09
CDX83505 Canola mitochondrion 31.47 26.88
CDY12850 Canola mitochondrion 31.47 26.88
CDX82625 Canola mitochondrion 31.18 26.84
CDY51089 Canola golgi, mitochondrion 31.18 26.84
CDY01412 Canola mitochondrion 31.47 26.82
CDY66853 Canola mitochondrion 31.18 26.77
CDY09869 Canola mitochondrion 28.53 26.5
CDX69574 Canola mitochondrion 28.24 26.23
CDY31228 Canola golgi 28.24 25.95
CDY03552 Canola golgi, mitochondrion 30.29 25.69
CDY30178 Canola mitochondrion 30.29 25.62
CDY46724 Canola mitochondrion 30.29 25.56
CDY21023 Canola golgi 27.65 25.0
CDY24895 Canola mitochondrion 27.06 24.66
CDY08638 Canola mitochondrion 27.35 24.54
CDY34605 Canola golgi 26.18 23.55
CDY57290 Canola cytosol 23.53 23.12
CDX73017 Canola cytosol 0.88 21.43
CDY14193 Canola mitochondrion 30.88 20.04
CDY66259 Canola cytosol 22.35 17.67
Protein Annotations
EnsemblPlants:CDY20597EnsemblPlantsGene:GSBRNA2T00012765001GO:A0A078G6K1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF17PFAM:PF02485ProteinID:CDY20597ProteinID:CDY20597.1TMHMM:TMhelixUniParc:UPI0004EB2894
UniProt:A0A078G6K1MapMan:35.1::::
Description
BnaC08g14610DBnaC08g14610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6K1]
Coordinates
chrLK032110:+:76812..78328
Molecular Weight (calculated)
39475.7 Da
IEP (calculated)
9.367
GRAVY (calculated)
-0.173
Length
340 amino acids
Sequence
(BLAST)
001: MKKKNITAIV KELNVRMKKE PITLRYIHIL VSVVFFSSTA SLLFLVSLNF NQQFQTSLFL VKDFSSNPLT SLPPPHSSGN DVADEELMWR VAMASGGVVM
101: NKTNPKVAFM FLTRWNLPLS PLWEMFFKGN EGFYSIYVHS SPEFTEEPLE SSVFYKKRIP SKTCIPLFNF TTVYTYLMRA TSSFLGSFDD PRPIGRGRYN
201: PRMFPHLSLS DWRKGNQWFE ISRKVAAEIV SDHRYYAVFK EHCRPPCYMD EHYLPTLVNK ICPEMNSNRT VTWVDWSRGG SHPARFMKED IRVGFLDWIR
301: FGSNCSYDGE VTNVCFLFAR KFHVSTLEPL MQIAPYLYGI
Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.