Factsheet for GSMUA_Achr8P31730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
golgi 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g03840.t01	Wine grape	cytosol	65.33	60.47
GSMUA_Achr8P29190_001	Banana	cytosol	55.47	55.68
GSMUA_Achr6P09800_001	Banana	cytosol	54.38	53.6
GSMUA_Achr7P23520_001	Banana	cytosol	56.57	52.54
Solyc05g009130.2.1	Tomato	golgi	63.5	46.4
GSMUA_Achr1P04590_001	Banana	cytosol	50.0	45.21
GSMUA_Achr1P04580_001	Banana	cytosol	48.18	44.59
Bra019894.1-P	Field mustard	golgi	58.76	42.71
CDY19328	Canola	golgi, mitochondrion	58.03	42.06
GSMUA_Achr8P08460_001	Banana	golgi	55.47	41.87
GSMUA_Achr1P14240_001	Banana	golgi	54.38	41.62
AT1G10880.1	Thale cress	golgi	57.3	40.67
GSMUA_Achr10P...	Banana	cytosol	41.61	40.57
GSMUA_Achr5P01370_001	Banana	golgi	53.65	40.16
GSMUA_Achr3P25730_001	Banana	golgi	50.73	38.72
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	41.61	38.51
CDY20597	Canola	golgi	47.08	37.94
GSMUA_Achr11P...	Banana	cytosol	40.15	37.8
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	54.01	37.19
GSMUA_Achr5P24160_001	Banana	mitochondrion	46.72	36.47
GSMUA_Achr4P12520_001	Banana	golgi	44.53	31.2
GSMUA_Achr4P05750_001	Banana	golgi	42.7	29.92
GSMUA_Achr2P14170_001	Banana	mitochondrion	37.59	28.07
GSMUA_Achr9P21910_001	Banana	golgi	36.86	26.17
GSMUA_Achr3P28930_001	Banana	golgi	33.94	24.28
CDX97918	Canola	golgi	55.84	24.25

Protein Annotations

EnsemblPlants:GSMUA_Achr8P31730_001	EnsemblPlants:GSMUA_Achr8T31730_001	EnsemblPlantsGene:GSMUA_Achr8G31730_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF17
PFAM:PF02485	SEG:seg	UniParc:UPI00029487AE	UniProt:M0TVC5	MapMan:35.1	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G31730_001]

Coordinates

chr8:+:33279732..33280889

Molecular Weight (calculated)

31738.0 Da

IEP (calculated)

10.156

GRAVY (calculated)

-0.351

Length

274 amino acids

Sequence
(BLAST)

001: MSDEELLRRA SAVPRAVESR RKAKVAFMFL TRGRIPFRVL WERFFRGHDG LFSVYIHASP DLEEEPPEES VFYRRRIPSK PVEWGRPSMV DAERRLLANA
101: LLDASNERFV LLSESCIPLF DFPTIYNYLI GSALSFVSSF DDTGKAGRGR YSRRMHPTVT LAEWRKGSQW FEVQRGLAVG IVSDRRYYPV FREHCRPPCY
201: VDEHYLPTAV AKLAPGLNAN RSVTWVDWMR SGSKCVYNNR TTTSSCFLFA RKFEATALGR LLLIADVTKR WNRH

Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)

001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI

Arabidopsis Description

Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.