Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19328 | Canola | golgi, mitochondrion | 54.52 | 91.01 |
| AT1G10880.1 | Thale cress | golgi | 51.19 | 83.68 |
| CDY20597 | Canola | golgi | 41.68 | 77.35 |
| VIT_01s0011g03840.t01 | Wine grape | cytosol | 28.53 | 60.81 |
| GSMUA_Achr8P31730_001 | Banana | cytosol | 24.25 | 55.84 |
| Solyc05g009130.2.1 | Tomato | golgi | 29.16 | 49.07 |
| CDX80552 | Canola | cytosol | 11.25 | 46.41 |
| CDX78440 | Canola | cytosol | 22.82 | 44.58 |
| CDX70676 | Canola | cytosol, golgi, nucleus | 27.89 | 43.78 |
| CDX78674 | Canola | cytosol, golgi, plasma membrane | 27.73 | 43.42 |
| CDX70417 | Canola | cytosol | 20.44 | 43.0 |
| CDX97141 | Canola | golgi | 25.99 | 42.49 |
| CDX97139 | Canola | golgi | 25.99 | 42.49 |
| CDX69465 | Canola | golgi | 27.1 | 42.22 |
| CDX69735 | Canola | golgi | 25.52 | 41.71 |
| CDY31036 | Canola | golgi | 24.88 | 41.64 |
| CDX81507 | Canola | golgi | 26.78 | 41.22 |
| CDX78439 | Canola | golgi | 26.15 | 41.15 |
| CDX73016 | Canola | mitochondrion | 22.5 | 40.92 |
| CDY26504 | Canola | cytosol | 9.83 | 40.79 |
| CDY44904 | Canola | golgi | 26.47 | 40.73 |
| CDX93443 | Canola | golgi | 24.72 | 40.62 |
| CDX94911 | Canola | golgi | 24.72 | 40.52 |
| CDY20644 | Canola | golgi | 24.72 | 40.0 |
| CDY59035 | Canola | golgi | 26.62 | 39.91 |
| CDY51451 | Canola | golgi | 23.93 | 39.63 |
| CDX97140 | Canola | golgi | 25.67 | 39.51 |
| CDX96025 | Canola | golgi, vacuole | 25.99 | 39.42 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 23.3 | 38.58 |
| CDX88209 | Canola | golgi | 21.39 | 38.57 |
| CDX96026 | Canola | golgi | 24.09 | 38.38 |
| CDY43927 | Canola | golgi | 23.45 | 38.05 |
| CDX87842 | Canola | golgi | 23.3 | 37.79 |
| CDX70416 | Canola | golgi | 25.83 | 37.3 |
| CDY28259 | Canola | golgi | 21.39 | 35.9 |
| CDX68738 | Canola | golgi | 21.39 | 35.9 |
| CDX89388 | Canola | cytosol | 12.84 | 35.53 |
| CDY49466 | Canola | cytosol | 13.47 | 33.07 |
| CDY42774 | Canola | mitochondrion | 19.49 | 32.45 |
| CDY70337 | Canola | golgi | 19.18 | 32.44 |
| CDY11878 | Canola | golgi | 19.97 | 32.39 |
| CDX88613 | Canola | golgi | 19.97 | 32.39 |
| CDX92736 | Canola | mitochondrion | 19.33 | 32.19 |
| CDY38285 | Canola | golgi | 19.81 | 32.13 |
| CDY25922 | Canola | golgi | 19.65 | 31.88 |
| CDX94406 | Canola | golgi | 19.02 | 31.66 |
| CDY12850 | Canola | mitochondrion | 19.65 | 31.16 |
| CDX83505 | Canola | mitochondrion | 19.65 | 31.16 |
| CDY03361 | Canola | mitochondrion | 19.49 | 31.14 |
| CDY01412 | Canola | mitochondrion | 19.65 | 31.08 |
| CDY66853 | Canola | mitochondrion | 19.33 | 30.81 |
| CDY51089 | Canola | golgi, mitochondrion | 19.18 | 30.63 |
| CDX82625 | Canola | mitochondrion | 18.86 | 30.13 |
| CDY30178 | Canola | mitochondrion | 19.18 | 30.1 |
| CDY46724 | Canola | mitochondrion | 19.02 | 29.78 |
| CDY03552 | Canola | golgi, mitochondrion | 18.86 | 29.68 |
| CDX69574 | Canola | mitochondrion | 17.12 | 29.51 |
| CDY09869 | Canola | mitochondrion | 17.12 | 29.51 |
| CDY24895 | Canola | mitochondrion | 17.27 | 29.22 |
| CDY08638 | Canola | mitochondrion | 17.43 | 29.02 |
| CDY31228 | Canola | golgi | 16.8 | 28.65 |
| CDY57290 | Canola | cytosol | 15.53 | 28.32 |
| CDY66012 | Canola | mitochondrion | 16.32 | 28.22 |
| CDY21023 | Canola | golgi | 16.48 | 27.66 |
| CDY34605 | Canola | golgi | 16.48 | 27.51 |
| CDY14193 | Canola | mitochondrion | 19.18 | 23.09 |
| CDX73017 | Canola | cytosol | 0.48 | 21.43 |
| CDY66259 | Canola | cytosol | 14.58 | 21.4 |
Protein Annotations
| EnsemblPlants:CDX97918 | EnsemblPlantsGene:GSBRNA2T00105262001 | GO:A0A078EEW5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | ncoils:Coil | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF17 | PFAM:PF02485 | ProteinID:CDX97918 | ProteinID:CDX97918.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE05A1 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g06690D
Coordinates
chrLK031902:-:38431..41887
Molecular Weight (calculated)
73984.4 Da
IEP (calculated)
10.345
GRAVY (calculated)
-0.623
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKQKFTAFV KELNVRMKKE PITLRYIHIL GTVVFFTSIS SLVILLALYL NQRLQTSLFF QNDHLSSNPL TSPSLSPPPP HGSDMSDEEL MRRAAIAPRE
101: AVMNETHPKV AFMFLTRWNL PLSPLWEIFF SGHEDFYSIY VHTSPEFTEE PPESSVFYKK RIPSKAVEWG RSSMMDAERR LLSHALLKPS NARFVLLSET
201: CIPLFNFTTV YTYLMGSTRS FLGSFDDPRP MGRGRYNPKM LPHVSLSDWR KGNQWFELSR RVAAEIISDH RYYNVFKDHC RPPCYIDEHY IPTLVNKICP
301: EMNSNRTVTW VDWSRGGSHP ARFVRKDIRV GFLDRIRFGS NCSYEGEVTN VAEIGRKKIN QSVRHQQQHG ELRKNQHRDA RLIDESEKMV EELQQQMFYI
401: GRKIPEKQSK ASYRLDYGWS YGEKMIYRNS VLDRKKMELE KLTFTHGACR DKKAVLYFSS GREPEVNIHN LNCRMLHEAR SIGEERLFLN MANKKKHSNS
501: GSSLKELDQQ VKFISLAIRP SIRPYSLRKL MELVLEREQL FRDAPVKGFL WNSLPSTTNL RKQIQSLEKS KEKRIKAISE RRKEIESHKR ELRKAENEIK
601: SLRKTLERIR QKKQKALQTL SLLKESLQEP L
101: AVMNETHPKV AFMFLTRWNL PLSPLWEIFF SGHEDFYSIY VHTSPEFTEE PPESSVFYKK RIPSKAVEWG RSSMMDAERR LLSHALLKPS NARFVLLSET
201: CIPLFNFTTV YTYLMGSTRS FLGSFDDPRP MGRGRYNPKM LPHVSLSDWR KGNQWFELSR RVAAEIISDH RYYNVFKDHC RPPCYIDEHY IPTLVNKICP
301: EMNSNRTVTW VDWSRGGSHP ARFVRKDIRV GFLDRIRFGS NCSYEGEVTN VAEIGRKKIN QSVRHQQQHG ELRKNQHRDA RLIDESEKMV EELQQQMFYI
401: GRKIPEKQSK ASYRLDYGWS YGEKMIYRNS VLDRKKMELE KLTFTHGACR DKKAVLYFSS GREPEVNIHN LNCRMLHEAR SIGEERLFLN MANKKKHSNS
501: GSSLKELDQQ VKFISLAIRP SIRPYSLRKL MELVLEREQL FRDAPVKGFL WNSLPSTTNL RKQIQSLEKS KEKRIKAISE RRKEIESHKR ELRKAENEIK
601: SLRKTLERIR QKKQKALQTL SLLKESLQEP L
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.