CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11878	Canola	golgi	98.97	98.97
CDY38285	Canola	golgi	95.12	95.12
CDY25922	Canola	golgi	94.86	94.86
AT5G57270.5	Thale cress	golgi	90.75	90.98
CDX89388	Canola	cytosol	47.56	81.14
CDY42774	Canola	mitochondrion	73.01	74.93
CDX94406	Canola	golgi	73.01	74.93
CDX92736	Canola	mitochondrion	71.98	73.88
CDY49466	Canola	cytosol	48.07	72.76
CDY66012	Canola	mitochondrion	63.75	67.95
CDY57290	Canola	cytosol	55.53	62.43
CDY03361	Canola	mitochondrion	61.95	61.01
HORVU2Hr1G100480.3	Barley	cytosol	50.64	60.62
CDY66853	Canola	mitochondrion	61.44	60.35
KRH19073	Soybean	golgi	60.93	60.31
CDY46724	Canola	mitochondrion	62.47	60.3
CDY30178	Canola	mitochondrion	62.21	60.2
CDY03552	Canola	golgi, mitochondrion	61.95	60.1
Solyc07g008940.2.1	Tomato	golgi	59.38	58.78
PGSC0003DMT400073984	Potato	golgi	58.87	58.27
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	60.15	58.06
CDY12850	Canola	mitochondrion	59.38	58.04
CDX83505	Canola	mitochondrion	59.38	58.04
CDY01412	Canola	mitochondrion	59.38	57.89
Zm00001d026261_P001	Maize	golgi, mitochondrion	56.56	57.44
CDX82625	Canola	mitochondrion	56.81	55.95
EES12818	Sorghum	golgi	55.53	55.81
KRH02808	Soybean	golgi	60.15	55.71
CDY51089	Canola	golgi, mitochondrion	56.56	55.7
Zm00001d024348_P002	Maize	mitochondrion	52.7	55.41
TraesCS2D01G428700.2	Wheat	mitochondrion	53.73	55.0
Zm00001d002382_P002	Maize	golgi, mitochondrion	54.5	54.78
TraesCS2B01G452200.4	Wheat	mitochondrion	53.47	54.74
KXG24737	Sorghum	golgi	53.47	54.31
TraesCS2A01G430900.2	Wheat	mitochondrion	53.73	54.15
CDX68738	Canola	golgi	51.67	53.46
CDY28259	Canola	golgi	51.67	53.46
Os08t0225400-01	Rice	cytosol, golgi	52.96	49.88
CDY14193	Canola	mitochondrion	62.21	46.18
CDX78440	Canola	cytosol	32.9	39.63
CDX80552	Canola	cytosol	15.42	39.22
CDX73016	Canola	mitochondrion	32.65	36.6
CDX70417	Canola	cytosol	28.02	36.33
CDX69735	Canola	golgi	35.99	36.27
CDX97139	Canola	golgi	34.7	34.97
CDX97141	Canola	golgi	34.7	34.97
CDX78439	Canola	golgi	35.99	34.91
CDX93443	Canola	golgi	33.68	34.11
CDX94911	Canola	golgi	33.68	34.03
CDX88209	Canola	golgi	30.59	34.0
CDX78674	Canola	cytosol, golgi, plasma membrane	35.22	33.99
CDY31036	Canola	golgi	32.9	33.95
CDY19328	Canola	golgi, mitochondrion	32.9	33.86
CDY51451	Canola	golgi	33.16	33.86
CDY43927	Canola	golgi	33.68	33.68
CDX87842	Canola	golgi	33.42	33.42
CDY20644	Canola	golgi	33.16	33.08
CDX70676	Canola	cytosol, golgi, nucleus	33.93	32.84
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	32.13	32.81
CDX97140	Canola	golgi	34.45	32.68
CDX69465	Canola	golgi	33.42	32.1
CDY20597	Canola	golgi	27.76	31.76
CDX69574	Canola	mitochondrion	29.82	31.69
CDY09869	Canola	mitochondrion	29.31	31.15
CDY26504	Canola	cytosol	12.08	30.92
CDX70416	Canola	golgi	34.7	30.89
CDY24895	Canola	mitochondrion	29.56	30.83
CDX96026	Canola	golgi	31.36	30.81
CDY08638	Canola	mitochondrion	29.82	30.61
CDX96025	Canola	golgi, vacuole	32.39	30.29
CDY21023	Canola	golgi	29.05	30.05
CDY59035	Canola	golgi	32.39	29.93
CDX81507	Canola	golgi	31.36	29.76
CDY44904	Canola	golgi	31.36	29.76
CDY31228	Canola	golgi	28.28	29.73
CDY34605	Canola	golgi	28.28	29.1
CDY70337	Canola	golgi	25.45	26.54
CDY66259	Canola	cytosol	24.16	21.86
CDX97918	Canola	golgi	32.39	19.97
CDX73017	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX88613	EnsemblPlantsGene:GSBRNA2T00148648001	GO:A0A078DN20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1
PFAM:PF02485	ProteinID:CDX88613	ProteinID:CDX88613.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF13C7
MapMan:35.1	:	:	:	:	:

Description

BnaA03g10360D

Coordinates

chrLK031856:-:180772..183377

Molecular Weight (calculated)

45230.5 Da

IEP (calculated)

9.431

GRAVY (calculated)

-0.363

Length

389 amino acids

Sequence
(BLAST)

001: MGETQNLHLP LRNRSSLKKP LLIVLLVCIT SILLVCTYMY PQHKVKSPAC EGLSTRGCQA ALSGWLDVHV RKHTDEEVAA RVVIRDILRT PPALTSKSKI
101: AFMFLTPGTL PFEKLWDKFL QGQEGRFSVY IHPSRLRPVH ISRHFSDREI HSDQVTWGRI SMVDAERRLL ANALEDPDNQ HFVLLSESCI PLHTFDYTYR
201: YLMQGNVSFI DSFEDRGPHG TGRHMDHMLP EIPRQDFRKG AQWFTMKRQH ALIVMADNLY YSKFRQFCRP GVEANKNCIA DEHYLPTFFH MLDPGGISNW
301: SVTYVDWSER RWHPKTYRAR DISLKFLKNI TSDDVSVHVT SVGKRGEELH WPCTWNGIRR PCYLFARKFH SDSVNKLVRL FPNYTSTVV

Best Arabidopsis Sequence Match ( AT5G57270.2 )
(BLAST)

001: MGENLHLSPR HRSSLKKPLL IVLLVCITSV LLVITYMYPQ HNNSKSSACA GLSSRGCQAA LSGWLPVHVR KFTDEEVAAR VVIKDILRLP PALTAKSKIA
101: FMFLTPGTLP FEKLWDKFFQ GQEGRFSIYI HPSRLRPVHI SRHFSDREIH SDHVTWGRIS MVDAERRLLA NALEDPDNQH FVLLSESCIP LHTFDYTYRY
201: LMHANVSFID SFEDLGPHGT GRHMDHMLPE IPRQDFRKGA QWFTMKRQHA VIVMADGLYY SKFREYCRPG VEANKNCIAD EHYLPTFFHM LDPGGISNWS
301: VTYVDWSERR WHPKTYRARD VSLKLLKNIT SDDMSVHVTS VGKRGEELRW PCTWKGIRRP CYLFARKLHS DALYKLVRLF PNYTSTVV

Arabidopsis Description

At5g57270 [Source:UniProtKB/TrEMBL;Acc:Q8W4D1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.