Factsheet for Solyc07g008940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073984	Potato	golgi	98.22	98.22
KRH19073	Soybean	golgi	73.28	73.28
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	70.48	68.73
KRH02808	Soybean	golgi	73.28	68.57
Bra010307.1-P	Field mustard	golgi, mitochondrion	65.65	64.34
CDY03552	Canola	golgi, mitochondrion	65.39	64.09
CDX89388	Canola	cytosol	37.15	64.04
HORVU2Hr1G100480.3	Barley	cytosol	52.42	63.38
AT4G30060.1	Thale cress	golgi	64.63	63.34
AT2G19160.1	Thale cress	golgi, mitochondrion	63.36	63.2
EES12818	Sorghum	golgi	62.09	63.05
Zm00001d026261_P001	Maize	golgi, mitochondrion	61.32	62.92
KXG24737	Sorghum	golgi	60.81	62.4
Zm00001d024348_P002	Maize	mitochondrion	58.52	62.16
Bra036729.1-P	Field mustard	mitochondrion	62.6	62.12
CDY12850	Canola	mitochondrion	62.85	62.06
CDX83505	Canola	mitochondrion	62.85	62.06
CDY03361	Canola	mitochondrion	62.34	62.03
CDY01412	Canola	mitochondrion	62.85	61.9
Bra012167.1-P	Field mustard	mitochondrion	62.85	61.9
CDY66853	Canola	mitochondrion	62.34	61.87
Zm00001d002382_P002	Maize	golgi, mitochondrion	60.81	61.76
CDY30178	Canola	mitochondrion	62.34	60.95
CDY46724	Canola	mitochondrion	62.34	60.79
TraesCS2D01G428700.2	Wheat	mitochondrion	58.27	60.26
TraesCS2B01G452200.4	Wheat	mitochondrion	58.02	60.0
Bra024111.1-P	Field mustard	mitochondrion	57.0	59.73
Bra013927.1-P	Field mustard	golgi, plastid	55.47	59.56
CDY49466	Canola	cytosol	38.93	59.53
CDY51089	Canola	golgi, mitochondrion	59.8	59.49
Bra002743.1-P	Field mustard	golgi	58.78	59.38
CDY11878	Canola	golgi	58.78	59.38
CDX88613	Canola	golgi	58.78	59.38
AT5G57270.5	Thale cress	golgi	58.52	59.28
CDY38285	Canola	golgi	58.52	59.13
CDX82625	Canola	mitochondrion	59.29	58.99
CDY25922	Canola	golgi	58.27	58.87
CDX94406	Canola	golgi	56.74	58.84
Bra038843.1-P	Field mustard	mitochondrion	59.54	58.79
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	58.02	58.61
TraesCS2A01G430900.2	Wheat	mitochondrion	57.51	58.55
CDX92736	Canola	mitochondrion	55.98	58.05
CDY42774	Canola	mitochondrion	55.73	57.78
Os08t0225400-01	Rice	cytosol, golgi	60.05	57.14
Bra019138.1-P	Field mustard	plastid	53.69	54.1
Bra010446.1-P	Field mustard	mitochondrion	53.44	53.98
CDY66012	Canola	mitochondrion	49.87	53.7
CDY14193	Canola	mitochondrion	65.65	49.24
CDY57290	Canola	cytosol	43.26	49.13
Solyc02g036250.1.1	Tomato	cytosol	15.78	39.49
Solyc08g065860.2.1	Tomato	golgi	36.39	37.53
Solyc12g036400.1.1	Tomato	extracellular	37.66	35.92
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	35.11	35.84
Solyc06g062490.2.1	Tomato	golgi	33.33	35.41
Solyc05g009130.2.1	Tomato	golgi	33.08	34.67
Solyc05g009120.2.1	Tomato	nucleus	34.35	34.62
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	36.9	34.04
Solyc05g009110.1.1	Tomato	golgi	33.33	34.03
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	31.04	32.62
Solyc01g103150.2.1	Tomato	golgi	32.32	31.99
Solyc02g080970.2.1	Tomato	plastid	30.28	30.43

Protein Annotations

EnsemblPlants:Solyc07g008940.2.1	EnsemblPlantsGene:Solyc07g008940.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1
PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000276B7E7	UniProt:K4CC13	MapMan:35.1

Description

No Description!

Coordinates

chr7:-:3946263..3952169

Molecular Weight (calculated)

45773.8 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.377

Length

393 amino acids

Sequence
(BLAST)

001: MKTSQGWRLG MKEMQILSAP RQRAQLKKPT WIIVLVSLVS LFLICAYVYP PQGSGACYVF SLNGCKGLSD WLPPAPAREL TDEELASHVV TNEILNTPPV
101: VPENPKIAFM FLIPGALPFE KLWDRFFQGH EGKFSVYVHA SKDKPVHFSR YFVNREIRSD KVVWGKISMV DAERRLLAYA LKETDNQHFV LLSDSCIPLR
201: DFDYVYNYLM YTNISFVDCF EDPGPHGSGR YSEHMLPEVE KKHFRKGAQW FTMKRQHALA VMADSLYYRK FRDYCRPNME GNRNCYSDEH YLPTFFHMLD
301: PTGISNWSVT HVDWSEGKWH PKSYVQKDIT YELMRNITSI SENVHVTSDA RKEVQINPCQ WNGNERPCYL FARKFLPEAL DSLLQLYPNY TSI

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.