Factsheet for Bra010307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03552	Canola	golgi, mitochondrion	99.25	99.25
AT4G30060.1	Thale cress	golgi	90.02	90.02
Bra024111.1-P	Field mustard	mitochondrion	82.29	88.0
Bra036729.1-P	Field mustard	mitochondrion	76.56	77.53
Bra012167.1-P	Field mustard	mitochondrion	74.06	74.44
Bra038843.1-P	Field mustard	mitochondrion	71.32	71.86
KRH19073	Soybean	golgi	64.84	66.16
Solyc07g008940.2.1	Tomato	golgi	64.34	65.65
PGSC0003DMT400073984	Potato	golgi	63.59	64.89
Bra013927.1-P	Field mustard	golgi, plastid	56.86	62.3
Bra002743.1-P	Field mustard	golgi	60.35	62.21
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	62.34	62.03
KRH02808	Soybean	golgi	64.84	61.9
HORVU2Hr1G100480.3	Barley	cytosol	47.63	58.77
Bra010446.1-P	Field mustard	mitochondrion	56.11	57.84
Zm00001d026261_P001	Maize	golgi, mitochondrion	55.11	57.7
Bra019138.1-P	Field mustard	plastid	56.11	57.69
EES12818	Sorghum	golgi	55.36	57.36
KXG24737	Sorghum	golgi	54.61	57.18
Zm00001d002382_P002	Maize	golgi, mitochondrion	55.11	57.11
Zm00001d024348_P002	Maize	mitochondrion	52.62	57.03
Bra011262.1-P	Field mustard	golgi	52.62	56.12
TraesCS2D01G428700.2	Wheat	mitochondrion	52.62	55.53
TraesCS2B01G452200.4	Wheat	mitochondrion	52.37	55.26
TraesCS2A01G430900.2	Wheat	mitochondrion	52.12	54.15
Os08t0225400-01	Rice	cytosol, golgi	54.86	53.27
Bra006342.1-P	Field mustard	cytosol	32.42	37.46
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	32.67	37.43
Bra030418.1-P	Field mustard	golgi	35.66	36.76
Bra031273.1-P	Field mustard	golgi	33.67	35.43
Bra008941.1-P	Field mustard	golgi	33.42	34.72
Bra006113.1-P	Field mustard	golgi	33.42	34.72
Bra006114.1-P	Field mustard	golgi	30.92	34.64
Bra019894.1-P	Field mustard	golgi	31.67	33.69
Bra009874.1-P	Field mustard	golgi	32.42	33.68
Bra008639.1-P	Field mustard	golgi	33.67	33.33
Bra034487.1-P	Field mustard	mitochondrion	30.92	33.24
Bra004302.1-P	Field mustard	golgi	32.42	32.83
Bra008752.1-P	Field mustard	mitochondrion	29.93	32.79
Bra004303.1-P	Field mustard	golgi, vacuole	33.92	32.69
Bra018450.1-P	Field mustard	golgi	32.17	31.93
Bra033941.1-P	Field mustard	golgi	32.42	31.71
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	31.92	30.92
Bra016802.1-P	Field mustard	golgi	27.93	29.79
Bra031797.1-P	Field mustard	cytosol	24.44	28.99

Protein Annotations

EnsemblPlants:Bra010307.1	EnsemblPlants:Bra010307.1-P	EnsemblPlantsGene:Bra010307	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025470C0	UniProt:M4D1F7
MapMan:35.1	:	:	:	:	:

Description

AT4G30060 (E=2e-210) | unknown protein

Coordinates

chrA08:+:13773801..13775913

Molecular Weight (calculated)

46742.1 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.382

Length

401 amino acids

Sequence
(BLAST)

001: MKAAKRWSLG NLRDMASSLP GPRHRAPSRR RARVYIVMAL SLIAFFAVIA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVISEILSN
101: PPVIRKDSKI AFMFLTPGAL PFERLWDRFF QGHEGKFSVY IHASKERPVH YSRYFVNREI RSDEVVWGRI SMVDAERRLL ANALRDPTNQ QFVLLSDSCV
201: PLRSFEYIYN YLMYSNVSYV DCFDDPGQHG SGRHMNHMLP EIQKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPTGISNW TVTQVDWSER KWHPKTYMPE DVTHELLNNL TSTDTVVHVT SVGVGEEIWM PCMWNGIKRP CYLFGRKFHP DTLDKLLDLF SNYTKSVSWQ
401: L

Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)

001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.