Factsheet for Bra034487.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
golgi 1
plasma membrane 1
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24895	Canola	mitochondrion	99.73	99.73
CDY08638	Canola	mitochondrion	97.32	95.78
AT1G62305.1	Thale cress	golgi	83.91	82.8
Bra016802.1-P	Field mustard	golgi	68.63	68.09
Solyc02g036250.1.1	Tomato	cytosol	26.01	61.78
VIT_10s0116g00980.t01	Wine grape	golgi	61.93	60.79
KRH11480	Soybean	mitochondrion	58.71	58.09
PGSC0003DMT400042390	Potato	golgi	57.91	57.6
Bra031797.1-P	Field mustard	cytosol	51.21	56.51
Solyc02g080970.2.1	Tomato	plastid	57.91	55.24
PGSC0003DMT400055283	Potato	golgi	54.42	54.57
GSMUA_Achr3P28930_001	Banana	golgi	55.5	54.05
HORVU3Hr1G065000.4	Barley	cytosol	45.58	52.63
GSMUA_Achr9P21910_001	Banana	golgi	53.62	51.81
KRH36494	Soybean	mitochondrion	58.45	51.78
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	51.21	48.48
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	50.94	48.35
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	50.67	48.34
Os01t0695200-01	Rice	plastid	46.92	48.21
Bra008752.1-P	Field mustard	mitochondrion	47.19	48.09
KXG33181	Sorghum	golgi, mitochondrion, plastid	50.4	48.08
TraesCS3B01G291600.1	Wheat	plastid	51.47	46.38
Bra006342.1-P	Field mustard	cytosol	29.76	31.99
Bra038843.1-P	Field mustard	mitochondrion	34.05	31.91
Bra030418.1-P	Field mustard	golgi	32.98	31.62
Bra012167.1-P	Field mustard	mitochondrion	33.78	31.58
Bra036729.1-P	Field mustard	mitochondrion	33.24	31.31
Bra031273.1-P	Field mustard	golgi	31.9	31.23
Bra010307.1-P	Field mustard	golgi, mitochondrion	33.24	30.92
Bra013927.1-P	Field mustard	golgi, plastid	30.29	30.87
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	28.95	30.86
Bra011262.1-P	Field mustard	golgi	31.1	30.85
Bra006114.1-P	Field mustard	golgi	29.49	30.73
Bra024111.1-P	Field mustard	mitochondrion	30.83	30.67
Bra006113.1-P	Field mustard	golgi	31.37	30.31
Bra008941.1-P	Field mustard	golgi	31.37	30.31
Bra019894.1-P	Field mustard	golgi	30.56	30.24
Bra018450.1-P	Field mustard	golgi	32.17	29.7
Bra002743.1-P	Field mustard	golgi	30.83	29.56
Bra004302.1-P	Field mustard	golgi	30.56	28.79
Bra009874.1-P	Field mustard	golgi	29.49	28.5
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	31.37	28.26
Bra010446.1-P	Field mustard	mitochondrion	28.95	27.76
Bra004303.1-P	Field mustard	golgi, vacuole	30.83	27.64
Bra033941.1-P	Field mustard	golgi	30.29	27.56
Bra019138.1-P	Field mustard	plastid	28.69	27.44
Bra008639.1-P	Field mustard	golgi	29.49	27.16

Protein Annotations

EnsemblPlants:Bra034487.1	EnsemblPlants:Bra034487.1-P	EnsemblPlantsGene:Bra034487	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF2	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	UniParc:UPI000253E569	UniProt:M4F094	MapMan:35.1	:

Description

AT1G62305 (E=1e-165) | unknown protein

Coordinates

chrScaffold000096:-:340748..342748

Molecular Weight (calculated)

43470.3 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.382

Length

373 amino acids

Sequence
(BLAST)

001: MARRSPPQIP ASRRGVVSFR WKLIAALSAS LCVLALFSIY HRESRPVRSR IPLQKYSGER PKMAFLFLAR HDLPLDFLWD RFFKGGDERN LSIYVHSTPG
101: FVFDQGTTRS HFFHNRQLKN SIEVVWGEAS MIAAERLLLA SALEEPSNQR FVLLSDSCVP LYDFGYIYTY LMSSPKSFVD SFLDTKDQRY TMKMFPVIPK
201: EKWRKGSQWI SLIRSHAEVI VNDDTVFPVF QKFCKRSLPL DPSNKWLYLK HRRHNCIPDE HYVQTLLTMR GLESEMERRT VTYTTWNLLA KKAEAKSWHP
301: LTFTSDNSGA KEIEEIKKIN HVYYETEYRT EWCRANSKPV PCFLFARKFT RGAAMRLLSE GLVESSTDTT TTS

Best Arabidopsis Sequence Match ( AT1G62305.1 )
(BLAST)

001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF

Arabidopsis Description

At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.