Factsheet for Zm00001d043768_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33181	Sorghum	golgi, mitochondrion, plastid	94.12	94.12
HORVU3Hr1G065000.4	Barley	cytosol	68.54	82.97
Os01t0695200-01	Rice	plastid	75.19	80.99
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	81.07	80.66
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	80.82	80.2
TraesCS3B01G291600.1	Wheat	plastid	80.56	76.09
Solyc02g036250.1.1	Tomato	cytosol	23.27	57.96
GSMUA_Achr3P28930_001	Banana	golgi	53.71	54.83
GSMUA_Achr9P21910_001	Banana	golgi	53.45	54.15
KRH11480	Soybean	mitochondrion	50.13	51.99
VIT_10s0116g00980.t01	Wine grape	golgi	49.36	50.79
CDY24895	Canola	mitochondrion	48.34	50.67
Bra034487.1-P	Field mustard	mitochondrion	48.34	50.67
PGSC0003DMT400042390	Potato	golgi	48.59	50.67
Solyc02g080970.2.1	Tomato	plastid	50.38	50.38
CDY31228	Canola	golgi	47.57	50.27
CDY21023	Canola	golgi	47.83	49.73
CDY08638	Canola	mitochondrion	48.08	49.6
Bra016802.1-P	Field mustard	golgi	47.31	49.2
PGSC0003DMT400055283	Potato	golgi	46.8	49.19
AT1G62305.1	Thale cress	golgi	47.06	48.68
AT1G11940.1	Thale cress	golgi	47.06	48.04
CDY34605	Canola	golgi	45.52	47.09
KRH36494	Soybean	mitochondrion	50.38	46.79
Bra031797.1-P	Field mustard	cytosol	38.62	44.67
CDY66259	Canola	cytosol	38.62	35.12
Zm00001d036482_P001	Maize	plasma membrane	30.69	32.09
Zm00001d014668_P001	Maize	plasma membrane	30.43	31.99
Zm00001d024348_P002	Maize	mitochondrion	30.18	31.89
Zm00001d009810_P003	Maize	mitochondrion, vacuole	42.2	31.07
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	28.39	30.41
Zm00001d026261_P001	Maize	golgi, mitochondrion	29.67	30.29
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	30.43	30.05
Zm00001d039970_P001	Maize	plastid	27.88	29.54
Zm00001d002382_P002	Maize	golgi, mitochondrion	29.16	29.46
Zm00001d031187_P002	Maize	plastid	29.67	29.15
Zm00001d036668_P004	Maize	plasma membrane	28.13	29.1
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	29.67	28.78
Zm00001d039969_P001	Maize	plasma membrane	29.67	28.78
Zm00001d035039_P001	Maize	plasma membrane	30.18	28.5
Zm00001d015429_P004	Maize	golgi	26.85	27.85
Zm00001d008568_P001	Maize	golgi	27.11	27.53
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	30.18	27.44
Zm00001d053763_P001	Maize	golgi	27.11	27.32
Zm00001d033890_P001	Maize	golgi	29.16	27.08
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	29.67	26.54
Zm00001d046936_P002	Maize	golgi	26.34	25.94
Zm00001d053393_P002	Maize	golgi, plastid	28.64	24.94
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	28.13	24.66

Protein Annotations

EMBL:EU969810	EnsemblPlants:Zm00001d043768_P001	EnsemblPlants:Zm00001d043768_T001	EnsemblPlantsGene:Zm00001d043768	EntrezGene:100192490	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF2	PFAM:PF02485	ProteinID:ONM38973.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000182E3CB	UniProt:B6TXU5	MapMan:35.1	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr3:-:209493445..209502914

Molecular Weight (calculated)

44562.0 Da

IEP (calculated)

10.290

GRAVY (calculated)

-0.248

Length

391 amino acids

Sequence
(BLAST)

001: MPVKRSASAL ALPPVGRRAR ARLCIRLAAP LSFLLLFVAL FHAQPLLGVP PAAQPPSAGP GKVAFLFLVR AGVPLDFLWD AFFRNGEEGK FSVYVHSAPG
101: FQLDRTTTGS PYFYGRQLAR SVKVVWGEAT MVEAERMLFA AALQDPANQR FVLLSDSCVP LYNFSSIYTY LMASPKSFVD SFVDKTEKRY NQNMSPAIPK
201: DKWRKGSQWV VLIRKHAEVV VGDKNVLKVF RRHCKMVVTK SLFRRRPNAR QLGFTFRRKQ ILKGVAQQEH DCIPDEHYVQ TLFSIKGLED ELERRTLTYT
301: SWNQSSNPKD KMTWHPMKFE YDTSSPEHIN AIKRIDHVNY QMEHRTEWCQ CNGTSAPCFL FARKFSYSAA MHLLEQGAIG TPKSAQLMIN F

Best Arabidopsis Sequence Match ( AT1G62305.1 )
(BLAST)

001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF

Arabidopsis Description

At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.