Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 98.22 | 97.97 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 79.64 | 96.9 |
| TraesCS3B01G291600.1 | Wheat | plastid | 97.46 | 92.51 |
| Os01t0695200-01 | Rice | plastid | 75.32 | 81.54 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 80.92 | 81.33 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 80.66 | 81.07 |
| Solyc02g036250.1.1 | Tomato | cytosol | 22.65 | 56.69 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 53.44 | 54.83 |
| KRH11480 | Soybean | mitochondrion | 52.16 | 54.38 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 51.65 | 53.42 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 52.16 | 53.11 |
| PGSC0003DMT400042390 | Potato | golgi | 50.64 | 53.07 |
| Solyc02g080970.2.1 | Tomato | plastid | 52.42 | 52.69 |
| CDY31228 | Canola | golgi | 49.36 | 52.43 |
| CDY21023 | Canola | golgi | 49.62 | 51.86 |
| Bra016802.1-P | Field mustard | golgi | 49.11 | 51.33 |
| CDY24895 | Canola | mitochondrion | 48.35 | 50.94 |
| Bra034487.1-P | Field mustard | mitochondrion | 48.35 | 50.94 |
| CDY08638 | Canola | mitochondrion | 48.6 | 50.4 |
| PGSC0003DMT400055283 | Potato | golgi | 47.58 | 50.27 |
| AT1G62305.1 | Thale cress | golgi | 47.33 | 49.21 |
| KRH36494 | Soybean | mitochondrion | 52.42 | 48.93 |
| AT1G11940.1 | Thale cress | golgi | 47.58 | 48.83 |
| CDY34605 | Canola | golgi | 46.06 | 47.88 |
| Bra031797.1-P | Field mustard | cytosol | 39.44 | 45.86 |
| TraesCS1A01G114000.1 | Wheat | golgi | 43.0 | 43.33 |
| CDY66259 | Canola | cytosol | 39.44 | 36.05 |
| TraesCS3A01G036900.1 | Wheat | cytosol | 26.21 | 34.68 |
| TraesCS3A01G037000.1 | Wheat | cytosol | 25.95 | 32.9 |
| TraesCS7A01G419900.1 | Wheat | golgi | 30.53 | 32.43 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 29.77 | 29.92 |
| TraesCS2A01G430900.2 | Wheat | mitochondrion | 29.26 | 29.79 |
| TraesCS7A01G489600.1 | Wheat | golgi | 28.5 | 29.63 |
| TraesCS3A01G386500.1 | Wheat | golgi | 29.26 | 29.41 |
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 30.03 | 29.14 |
| TraesCS1A01G022400.1 | Wheat | golgi, vacuole | 25.95 | 28.98 |
| TraesCS6A01G154200.1 | Wheat | golgi | 28.75 | 28.97 |
| TraesCS5A01G010800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome, plastid | 28.5 | 26.67 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 28.5 | 23.98 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G258700.1 | EnsemblPlantsGene:TraesCS3A01G258700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 | PFAM:PF02485 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:480438567..480442616
Molecular Weight (calculated)
44450.6 Da
IEP (calculated)
9.796
GRAVY (calculated)
-0.233
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVAKRPPAP WALALPAGRR ARARLCLRLA APLSFLLLVA AFLRTQPPAA PLDALPPSAG PGKVAFLFLA RAGLPLDFLW DAFFRNGEEG RFSVYVHSAP
101: GFVLDRTTTG SPYFYGRQLA RAVKVAWGEP TMVEAEKMLF AAALEDPANQ RFVLLSDSCV PLYNFSYTYT YLMGSPRSIV DSFTDKTEKR YNPNMSPVIR
201: KDKWRKGSQW VMLIRKHAEV VVGDKHVFQV FRKHCKMVVT NALLGQKPAN ARRLGFVRRK QISKGAAQEE HDCIPDEHYV QTLFSIKGLE DELERRTLTY
301: TSWNQSTLDP KDKMTWHPTT FEYDAASPEQ INAIKRIDHV NYEVEHRTEW CQSNGTSVPC FLFARKFSYG AAMHLLEDGA FGLLKSAQLL VNF
101: GFVLDRTTTG SPYFYGRQLA RAVKVAWGEP TMVEAEKMLF AAALEDPANQ RFVLLSDSCV PLYNFSYTYT YLMGSPRSIV DSFTDKTEKR YNPNMSPVIR
201: KDKWRKGSQW VMLIRKHAEV VVGDKHVFQV FRKHCKMVVT NALLGQKPAN ARRLGFVRRK QISKGAAQEE HDCIPDEHYV QTLFSIKGLE DELERRTLTY
301: TSWNQSTLDP KDKMTWHPTT FEYDAASPEQ INAIKRIDHV NYEVEHRTEW CQSNGTSVPC FLFARKFSYG AAMHLLEDGA FGLLKSAQLL VNF
001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
Arabidopsis Description
At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.