Factsheet for TraesCS6A01G154200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G143800.1	Wheat	golgi	98.46	98.46
TraesCS6B01G181900.1	Wheat	golgi	98.21	98.21
HORVU6Hr1G030990.4	Barley	golgi	97.69	97.69
Zm00001d015429_P004	Maize	golgi	81.79	84.62
Zm00001d053763_P001	Maize	golgi	82.31	82.73
EES04616	Sorghum	golgi	81.79	82.64
Os02t0175500-01	Rice	golgi	81.79	81.79
TraesCS7A01G489600.1	Wheat	golgi	72.82	75.13
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	53.59	70.61
GSMUA_Achr11P...	Banana	cytosol	49.74	66.67
GSMUA_Achr4P05750_001	Banana	golgi	66.41	66.24
GSMUA_Achr4P12520_001	Banana	golgi	65.13	64.96
TraesCS7A01G419900.1	Wheat	golgi	56.67	59.73
TraesCS2A01G430900.2	Wheat	mitochondrion	57.69	58.29
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	37.95	37.85
TraesCS3A01G037000.1	Wheat	cytosol	29.23	36.77
TraesCS3A01G036900.1	Wheat	cytosol	27.44	36.03
TraesCS3A01G386500.1	Wheat	golgi	33.85	33.76
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	34.36	31.9
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	32.82	31.6
TraesCS1A01G022400.1	Wheat	golgi, vacuole	27.44	30.4
TraesCS1A01G114000.1	Wheat	golgi	29.74	29.74
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	28.97	28.75
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	32.05	26.77

Protein Annotations

EnsemblPlants:TraesCS6A01G154200.1	EnsemblPlantsGene:TraesCS6A01G154200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF19	PFAM:PF02485
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:142784857..142790124

Molecular Weight (calculated)

45198.8 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.182

Length

390 amino acids

Sequence
(BLAST)

001: MKVPRVWQRG SKDMTAMPHP RHRTAKKPMW IIVLLSIVCV SLIGAYVYPP RRYSTCYFFA SSVCTPFKDW LPAVTRREPT DQEVFSSVVI RDLLSMPMPV
101: SKKPKIAFMF LTPGSLPFEK LWENFLQGHE GRYSIYIHAS REKPVHSSPL FVGREIRSEK VVWGRVSMVD AEKRLLGNAL LDIDNQFFVL LSDSCIPLHT
201: FDYIYNYLMG TNVSFIDSFL DPGPHGSGRY SIEMFPEIEH RDFRKGAQWF AITRRHAILI MADNLYYRKF KLYCKPTVGR NCIADEHYLP TLFKIVDPGG
301: ISNYSVTHVD WSEGKWHPRS YRAADITYEL LRNITYFNEI VHIASDESRT VTSTPCILNG RKRPCFLFAR KFYPDAVNNL LKLFPSYTSA

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.