Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 4
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 65.73 | 86.82 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 82.61 | 82.61 |
| GSMUA_Achr10P... | Banana | cytosol | 58.82 | 81.85 |
| GSMUA_Achr11P... | Banana | cytosol | 60.87 | 81.79 |
| GSMUA_Achr5P24160_001 | Banana | mitochondrion | 67.77 | 75.5 |
| Zm00001d015429_P004 | Maize | golgi | 69.57 | 72.15 |
| HORVU7Hr1G109810.1 | Barley | golgi | 69.31 | 71.69 |
| TraesCS7A01G489600.1 | Wheat | golgi | 69.05 | 71.43 |
| TraesCS7D01G476000.1 | Wheat | golgi | 69.05 | 71.43 |
| Os06t0700500-01 | Rice | golgi | 67.52 | 70.97 |
| Os06t0661900-01 | Rice | golgi | 69.31 | 70.94 |
| TraesCS7B01G392700.1 | Wheat | golgi | 68.54 | 70.9 |
| Zm00001d036668_P004 | Maize | plasma membrane | 67.52 | 69.84 |
| KXG20537 | Sorghum | mitochondrion | 67.52 | 69.84 |
| EES04616 | Sorghum | golgi | 68.54 | 69.43 |
| KXG20769 | Sorghum | golgi | 65.47 | 68.82 |
| Zm00001d053763_P001 | Maize | golgi | 68.29 | 68.81 |
| Zm00001d036482_P001 | Maize | plasma membrane | 65.47 | 68.45 |
| HORVU7Hr1G097200.3 | Barley | golgi | 64.45 | 68.11 |
| Zm00001d014668_P001 | Maize | plasma membrane | 64.45 | 67.74 |
| Os02t0175500-01 | Rice | golgi | 67.01 | 67.18 |
| TraesCS7D01G412700.1 | Wheat | golgi | 63.43 | 67.03 |
| TraesCS7A01G419900.1 | Wheat | golgi | 63.43 | 67.03 |
| TraesCS7B01G320800.1 | Wheat | golgi | 63.17 | 66.76 |
| TraesCS6D01G143800.1 | Wheat | golgi | 65.47 | 65.64 |
| Zm00001d046936_P002 | Maize | golgi | 66.5 | 65.49 |
| HORVU6Hr1G030990.4 | Barley | golgi | 64.96 | 65.13 |
| TraesCS6A01G154200.1 | Wheat | golgi | 64.96 | 65.13 |
| TraesCS6B01G181900.1 | Wheat | golgi | 64.96 | 65.13 |
| GSMUA_Achr8P29190_001 | Banana | cytosol | 31.97 | 45.79 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 32.23 | 45.32 |
| GSMUA_Achr7P23520_001 | Banana | cytosol | 33.76 | 44.75 |
| GSMUA_Achr8P31730_001 | Banana | cytosol | 31.2 | 44.53 |
| GSMUA_Achr1P04580_001 | Banana | cytosol | 31.2 | 41.22 |
| GSMUA_Achr1P04590_001 | Banana | cytosol | 31.2 | 40.26 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 34.78 | 37.99 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 34.02 | 37.05 |
| GSMUA_Achr8P08460_001 | Banana | golgi | 34.27 | 36.91 |
| GSMUA_Achr5P01370_001 | Banana | golgi | 31.71 | 33.88 |
| GSMUA_Achr2P14170_001 | Banana | mitochondrion | 31.46 | 33.52 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 31.46 | 31.87 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 32.23 | 31.66 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 30.18 | 30.81 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P12520_001 | EnsemblPlants:GSMUA_Achr4T12520_001 | EnsemblPlantsGene:GSMUA_Achr4G12520_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF29 | PFAM:PF02485 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000296226C |
| UniProt:M0SNB7 | MapMan:35.1 | : | : | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G12520_001]
Coordinates
chr4:+:9273795..9281323
Molecular Weight (calculated)
45612.9 Da
IEP (calculated)
8.259
GRAVY (calculated)
-0.235
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVQRHRPTS RRPHWIIILI CLVCVSLIGA YVYPPHRYSA CYIFASSICS PFTDWVPPVA HVLTDDEFAS HVLINDILSA PYKEPKNPKI AFMFLTPGSL
101: PFEKLWEKFF LGHEGRFSIY VHASREKPDH VSPLFVGRDI QSGKVVWGKI SMVDAERRLL ANALQDPDNQ HFVLLSDSCV PLHNFDYVYN YLMGTNVSFI
201: DCFWDPGPHG NARYTEHMLP EIEEKDFRKG SQRTRRWMNV RVEVQLGWWF SMKRRHALIV LADSLYYTKF KLYCKPGFDS RNCYADEHYL PTLLSMVDPT
301: GIANWSVTHV DWSEGKWHPK AYRAQDVTFE ILKNISSIDE SYHVTSDEKK VVTVKPCLWN GMKRPCYLFA RKFYPEALHN LMQLFSNYTL I
101: PFEKLWEKFF LGHEGRFSIY VHASREKPDH VSPLFVGRDI QSGKVVWGKI SMVDAERRLL ANALQDPDNQ HFVLLSDSCV PLHNFDYVYN YLMGTNVSFI
201: DCFWDPGPHG NARYTEHMLP EIEEKDFRKG SQRTRRWMNV RVEVQLGWWF SMKRRHALIV LADSLYYTKF KLYCKPGFDS RNCYADEHYL PTLLSMVDPT
301: GIANWSVTHV DWSEGKWHPK AYRAQDVTFE ILKNISSIDE SYHVTSDEKK VVTVKPCLWN GMKRPCYLFA RKFYPEALHN LMQLFSNYTL I
001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
Arabidopsis Description
At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.