Factsheet for GSMUA_Achr5P24160_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	68.95	86.12
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	62.96	74.66
GSMUA_Achr11P...	Banana	cytosol	60.11	72.51
GSMUA_Achr4P12520_001	Banana	golgi	75.5	67.77
GSMUA_Achr4P05750_001	Banana	golgi	74.93	67.26
GSMUA_Achr8P31730_001	Banana	cytosol	36.47	46.72
GSMUA_Achr8P29190_001	Banana	cytosol	36.18	46.52
GSMUA_Achr6P09800_001	Banana	cytosol	35.33	44.6
GSMUA_Achr7P23520_001	Banana	cytosol	36.75	43.73
GSMUA_Achr1P04590_001	Banana	cytosol	35.9	41.58
GSMUA_Achr1P04580_001	Banana	cytosol	34.47	40.88
GSMUA_Achr3P25730_001	Banana	golgi	37.61	36.77
GSMUA_Achr8P08460_001	Banana	golgi	36.18	34.99
GSMUA_Achr1P14240_001	Banana	golgi	35.33	34.64
GSMUA_Achr5P01370_001	Banana	golgi	34.19	32.79
GSMUA_Achr2P14170_001	Banana	mitochondrion	32.19	30.79
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	34.19	30.15
GSMUA_Achr9P21910_001	Banana	golgi	32.48	29.53
GSMUA_Achr3P28930_001	Banana	golgi	30.2	27.68

Protein Annotations

EnsemblPlants:GSMUA_Achr5P24160_001	EnsemblPlants:GSMUA_Achr5T24160_001	EnsemblPlantsGene:GSMUA_Achr5G24160_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF19
PFAM:PF02485	UniParc:UPI000296DFE4	UniProt:M0T191	MapMan:35.1	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G24160_001]

Coordinates

chr5:+:25622078..25630159

Molecular Weight (calculated)

40761.3 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.181

Length

351 amino acids

Sequence
(BLAST)

001: MALVALYVHP LQRYSACYFF SSSVCSLKEW LPPVHTRVYN DDELAARVVI RDILLMPAVE SKNPKIAFMF LTPGSLPFEK LWEKFFLGHG DKFSIYVHAS
101: REKPLHISSL FVGKEIRSEK VAWGKISMVD AEKRLLANAL QDIDNQHFVL LSDSCVPLHK FDYIYNYLLG INVSFIDGFK DPGPHGAGRY SEHMLPEIEK
201: EDFRKGAQWF SIKRQHAVLI LADNVYYTKF KLYCRPRMEG RNCYSDEHYL PTLFHMVDPG GIANWSVTHV DWSEGKWHPK AYRARDVTFD LLKNIISIDE
301: SIHVTSDSKK VVQRRPCLWN GMKRPCYLFA RKFYPEALNS LMHLLSNFTI I

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.