Factsheet for GSMUA_Achr5P01370_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
mitochondrion 2
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23520_001	Banana	cytosol	63.93	79.32
GSMUA_Achr8P08460_001	Banana	golgi	72.4	73.0
GSMUA_Achr8P29190_001	Banana	cytosol	50.0	67.03
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	71.04	65.33
VIT_12s0035g01710.t01	Wine grape	golgi	59.02	56.99
CDX93443	Canola	golgi	59.02	56.25
CDY31036	Canola	golgi	57.92	56.23
GSMUA_Achr6P09800_001	Banana	cytosol	42.35	55.76
CDX94911	Canola	golgi	58.2	55.32
KRH26270	Soybean	golgi	57.65	55.09
CDY20644	Canola	golgi	58.47	54.87
KRH06031	Soybean	golgi, plasma membrane, plastid	58.47	54.31
PGSC0003DMT400063986	Potato	golgi	58.47	53.9
GSMUA_Achr8P31730_001	Banana	cytosol	40.16	53.65
Solyc01g103150.2.1	Tomato	golgi	57.92	53.4
Bra018450.1-P	Field mustard	golgi	58.47	52.97
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	59.56	52.66
AT1G10280.1	Thale cress	golgi	58.74	52.18
GSMUA_Achr1P04590_001	Banana	cytosol	39.62	47.85
GSMUA_Achr1P14240_001	Banana	golgi	46.45	47.49
GSMUA_Achr1P04580_001	Banana	cytosol	37.98	46.96
GSMUA_Achr3P25730_001	Banana	golgi	40.44	41.23
GSMUA_Achr10P...	Banana	cytosol	28.42	37.01
GSMUA_Achr11P...	Banana	cytosol	29.23	36.77
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	29.23	36.15
GSMUA_Achr5P24160_001	Banana	mitochondrion	32.79	34.19
GSMUA_Achr4P12520_001	Banana	golgi	33.88	31.71
GSMUA_Achr4P05750_001	Banana	golgi	33.61	31.46
GSMUA_Achr2P14170_001	Banana	mitochondrion	29.51	29.43
GSMUA_Achr9P21910_001	Banana	golgi	29.23	27.72
GSMUA_Achr3P28930_001	Banana	golgi	27.87	26.63

Protein Annotations

EnsemblPlants:GSMUA_Achr5P01370_001	EnsemblPlants:GSMUA_Achr5T01370_001	EnsemblPlantsGene:GSMUA_Achr5G01370_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF3	PFAM:PF02485	TMHMM:TMhelix	UniParc:UPI00029536B0	UniProt:M0SUR6	MapMan:35.1

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G01370_001]

Coordinates

chr5:+:790628..793323

Molecular Weight (calculated)

42391.9 Da

IEP (calculated)

9.152

GRAVY (calculated)

-0.190

Length

366 amino acids

Sequence
(BLAST)

001: MKPRPQADQE EVDYFPTTPR KDQSIRWLVK LVTFLVVFMA GVVLGLSVSA HYTRHYNSRT ELFFPRATYA GNCDKESLSI KRFVQPTCSM HGMSDDELFW
101: RATVVPIMAE YPFERVPKVA FLFMTKGPLP FVPLWDRFFK GHRGLYSIYV HTLPDYKLSV PETSAFYGRQ IPSQEVSWGS ITLLDAEKRL LANALLDFSN
201: ERFVLLSESC IPVYSFPTVY EYLVNSAHSF VDSYDKDIQQ ARGRYNWRMS PKIKLSQWRK GSEWFELNRG LAIDIVAEHT YYSLFRKYCK PSCYPDEHYI
301: PTYLNMFHGS LNANRSVTWF IQSIRNNGTS CMYNSRSTSV CFLFARKFAP SALAPLLNVS STVMGF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.