CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
golgi 2
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06031	Soybean	golgi, plasma membrane, plastid	86.16	83.76
GSMUA_Achr7P23520_001	Banana	cytosol	53.52	69.49
VIT_12s0035g01710.t01	Wine grape	golgi	63.71	64.38
GSMUA_Achr8P29190_001	Banana	cytosol	45.69	64.1
CDX93443	Canola	golgi	63.19	63.02
CDY31036	Canola	golgi	61.88	62.86
CDX94911	Canola	golgi	63.19	62.86
CDY20644	Canola	golgi	62.4	61.28
PGSC0003DMT400063986	Potato	golgi	61.88	59.7
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	63.97	59.18
Solyc01g103150.2.1	Tomato	golgi	61.1	58.94
Bra018450.1-P	Field mustard	golgi	62.14	58.91
AT1G10280.1	Thale cress	golgi	62.92	58.5
GSMUA_Achr5P01370_001	Banana	golgi	55.09	57.65
GSMUA_Achr8P08460_001	Banana	golgi	54.57	57.58
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	58.49	55.31
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	58.22	55.06
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	58.22	55.06
HORVU7Hr1G076790.5	Barley	golgi	58.49	54.77
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	56.14	54.02
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	56.92	53.56
KRH01729	Soybean	cytosol	42.04	53.49
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	57.18	53.16
Zm00001d035039_P001	Maize	plasma membrane	56.66	52.42
KRH46947	Soybean	cytosol	40.99	52.16
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	54.31	50.49
KRH13326	Soybean	cytosol	27.15	48.83
KRH48972	Soybean	cytosol	27.15	48.83
TraesCS2B01G616400.1	Wheat	golgi	53.0	48.56
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	52.74	48.56
KRH05512	Soybean	nucleus	48.3	48.56
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	52.22	47.96
KRH15500	Soybean	nucleus	47.26	47.63
TraesCSU01G137600.1	Wheat	cytosol, golgi, plasma membrane	53.0	47.54
KRH60391	Soybean	golgi, plastid	45.95	46.81
KRH47176	Soybean	cytosol, golgi, plasma membrane	46.21	45.74
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	51.96	45.54
KRH44223	Soybean	cytosol, golgi, plasma membrane	45.95	45.48
KRH41690	Soybean	golgi	44.13	45.43
EES11719	Sorghum	golgi, mitochondrion, peroxisome	52.22	44.84
KRH35920	Soybean	golgi, plasma membrane	44.39	40.96
KRG90861	Soybean	golgi, plasma membrane	44.39	40.38
KRH39163	Soybean	golgi	47.26	40.13
KRH48513	Soybean	golgi	45.95	39.37
KRH38159	Soybean	golgi	44.91	39.36
KRH19073	Soybean	golgi	33.68	32.82
KRH16109	Soybean	mitochondrion	33.68	32.74
KRH05009	Soybean	golgi, mitochondrion	33.16	32.23
KRH11480	Soybean	mitochondrion	31.33	31.83
KRH56549	Soybean	golgi	29.77	31.32
KRH02808	Soybean	golgi	33.94	30.95
KRG93228	Soybean	golgi	29.77	30.81
KRH36494	Soybean	mitochondrion	31.07	28.27

Protein Annotations

EMBL:ACUP02007703	EnsemblPlants:KRH26270	EnsemblPlantsGene:GLYMA_12G164300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF3	PFAM:PF02485	ProteinID:KRH26270	ProteinID:KRH26270.1	TMHMM:TMhelix	UniParc:UPI000233D192
UniProt:I1LT93	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:31897168..31898731

Molecular Weight (calculated)

44337.9 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.287

Length

383 amino acids

Sequence
(BLAST)

001: MGRREKDQDQ DRGSGGEKHA GLLRLAQLVT FLVVFAGGVV IGLTTSSHIN SQNLISQPYQ YISVRNVPSP SENDELESFL HPLNLSHRFS DEELFWRASL
101: MPKKESYPYA RVPKVAFMFL TRGPLPMLPL WERFFHGHSS LFSIYIHAPP RYTLNISHSS PFYLRNIPSQ DVSWGTFTLA DAERRLLANA LLDFSNERFL
201: LLSETCIPVY DFPTVYRYLT HSSLSFVESY DEPTRYGRGR YSRHMLPHIH LRHWRKGSQW FELNRSLAVY IVSDTKYYSL FRKYCKPACY PDEHYIPTFL
301: HMFHGSLNSN RTVTWVDWSM LGPHPATFGR ANITAAFLQS IRNNGSLCPY NSEMTSICYL FARKFDPSAL EPLLNLSSEV MNF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.