Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P23520_001 | Banana | cytosol | 57.26 | 73.56 |
| GSMUA_Achr8P29190_001 | Banana | cytosol | 48.81 | 67.77 |
| CDX93443 | Canola | golgi | 65.7 | 64.84 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 67.02 | 64.47 |
| CDX94911 | Canola | golgi | 64.91 | 63.9 |
| KRH26270 | Soybean | golgi | 64.38 | 63.71 |
| CDY31036 | Canola | golgi | 63.32 | 63.66 |
| CDY20644 | Canola | golgi | 64.12 | 62.31 |
| PGSC0003DMT400063986 | Potato | golgi | 64.38 | 61.46 |
| Solyc01g103150.2.1 | Tomato | golgi | 64.12 | 61.21 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 65.96 | 60.39 |
| GSMUA_Achr8P08460_001 | Banana | golgi | 57.78 | 60.33 |
| Bra018450.1-P | Field mustard | golgi | 64.12 | 60.15 |
| AT1G10280.1 | Thale cress | golgi | 64.91 | 59.71 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 46.17 | 59.52 |
| VIT_14s0006g02700.t01 | Wine grape | cytosol | 46.44 | 59.46 |
| GSMUA_Achr5P01370_001 | Banana | golgi | 56.99 | 59.02 |
| VIT_17s0000g03400.t01 | Wine grape | cytosol | 44.85 | 57.43 |
| VIT_01s0011g03840.t01 | Wine grape | cytosol | 44.59 | 57.09 |
| VIT_17s0000g03420.t01 | Wine grape | cytosol | 43.27 | 55.78 |
| VIT_17s0000g03410.t01 | Wine grape | cytosol | 43.27 | 55.59 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 58.31 | 55.53 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 59.37 | 55.28 |
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 58.58 | 54.81 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 58.58 | 54.81 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 58.58 | 54.81 |
| HORVU7Hr1G076790.5 | Barley | golgi | 58.58 | 54.28 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 58.05 | 53.4 |
| Zm00001d035039_P001 | Maize | plasma membrane | 58.05 | 53.14 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 56.2 | 51.2 |
| TraesCS2B01G616400.1 | Wheat | golgi | 56.2 | 50.96 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 55.15 | 50.12 |
| TraesCSU01G137600.1 | Wheat | cytosol, golgi, plasma membrane | 55.94 | 49.65 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 53.56 | 49.27 |
| VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 49.87 | 49.09 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 52.24 | 45.31 |
| EES11719 | Sorghum | golgi, mitochondrion, peroxisome | 52.51 | 44.62 |
| VIT_01s0011g03850.t01 | Wine grape | golgi, plastid | 47.23 | 44.2 |
| VIT_14s0066g00820.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 30.61 | 35.8 |
| VIT_04s0008g02630.t01 | Wine grape | golgi | 34.04 | 32.99 |
| VIT_11s0103g00490.t01 | Wine grape | golgi, plastid | 34.56 | 32.51 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 31.93 | 31.84 |
Protein Annotations
| EntrezGene:100250508 | wikigene:100250508 | MapMan:35.1 | ProteinID:CCB55010 | ProteinID:CCB55010.1 | UniProt:F6HK07 |
| EMBL:FN595990 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | EntrezGene:LOC100250508 | wikigene:LOC100250508 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF3 | TMHMM:TMhelix | UniParc:UPI00015CB318 | ArrayExpress:VIT_12s0035g01710 | EnsemblPlantsGene:VIT_12s0035g01710 |
| EnsemblPlants:VIT_12s0035g01710.t01 | RefSeq:XP_002268014 | RefSeq:XP_002268014.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr12:-:21802858..21807026
Molecular Weight (calculated)
43666.6 Da
IEP (calculated)
9.730
GRAVY (calculated)
-0.156
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSTTVDRHI GLLNLAKTLS FLVVFVAGVV VGMTASSQIN RYFVSQAKLY FYSNMNNHFS AMQIPNPALR NCSSEANLTH GFSDNELFWR ASMVPRRAEY
101: PFKRVPKVAF MFLTRGPLPL MPLWERFFEG HRKYFSVYVH ALPGFELNVS MHSAFYKRQI PSKSVEWGTV ALAEAERRLL ANALLDFSNE RFVLLSESCI
201: PIYNFPIVYK YLINSDYSFV ESYDDPSRYG RGRYSRNMLP NIKLYQWRKG SQWFELSREL AVNIVADTKY YTLFKKYCKP SCYPDEHYIQ TFLNMFYGSL
301: NANRSVTWVD WSMGGPHPAT LGAANITEGF IQALRNNGTV CPYNSEKTSV CYLFARKFAP SALEPLLNLT SKVMGFKNF
101: PFKRVPKVAF MFLTRGPLPL MPLWERFFEG HRKYFSVYVH ALPGFELNVS MHSAFYKRQI PSKSVEWGTV ALAEAERRLL ANALLDFSNE RFVLLSESCI
201: PIYNFPIVYK YLINSDYSFV ESYDDPSRYG RGRYSRNMLP NIKLYQWRKG SQWFELSREL AVNIVADTKY YTLFKKYCKP SCYPDEHYIQ TFLNMFYGSL
301: NANRSVTWVD WSMGGPHPAT LGAANITEGF IQALRNNGTV CPYNSEKTSV CYLFARKFAP SALEPLLNLT SKVMGFKNF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.