Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P23520_001 | Banana | cytosol | 73.63 | 68.14 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 57.51 | 56.47 |
| GSMUA_Achr8P31730_001 | Banana | cytosol | 55.68 | 55.47 |
| GSMUA_Achr8P08460_001 | Banana | golgi | 68.86 | 51.79 |
| GSMUA_Achr5P01370_001 | Banana | golgi | 67.03 | 50.0 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 67.77 | 48.81 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 69.96 | 47.99 |
| GSMUA_Achr1P04580_001 | Banana | cytosol | 51.28 | 47.3 |
| CDY31036 | Canola | golgi | 64.47 | 46.68 |
| GSMUA_Achr1P04590_001 | Banana | cytosol | 51.65 | 46.53 |
| CDX93443 | Canola | golgi | 64.47 | 45.83 |
| CDX94911 | Canola | golgi | 64.47 | 45.71 |
| KRH26270 | Soybean | golgi | 64.1 | 45.69 |
| CDY20644 | Canola | golgi | 64.47 | 45.13 |
| PGSC0003DMT400063986 | Potato | golgi | 65.2 | 44.84 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 64.1 | 44.42 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 58.24 | 44.41 |
| Solyc01g103150.2.1 | Tomato | golgi | 64.47 | 44.33 |
| Bra018450.1-P | Field mustard | golgi | 64.47 | 43.56 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 64.84 | 42.75 |
| AT1G10280.1 | Thale cress | golgi | 64.1 | 42.48 |
| GSMUA_Achr11P... | Banana | cytosol | 43.96 | 41.24 |
| GSMUA_Achr10P... | Banana | cytosol | 41.76 | 40.57 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 43.96 | 40.54 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 53.11 | 40.39 |
| GSMUA_Achr5P24160_001 | Banana | mitochondrion | 46.52 | 36.18 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 45.79 | 31.97 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 45.79 | 31.97 |
| GSMUA_Achr2P14170_001 | Banana | mitochondrion | 37.0 | 27.52 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 38.83 | 27.46 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 37.36 | 26.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P29190_001 | EnsemblPlants:GSMUA_Achr8T29190_001 | EnsemblPlantsGene:GSMUA_Achr8G29190_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF3 |
| PFAM:PF02485 | UniParc:UPI00029599FB | UniProt:M0TUM2 | MapMan:35.1 | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G29190_001]
Coordinates
chr8:-:31677838..31679251
Molecular Weight (calculated)
31682.0 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.132
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDEELFWRA SMVPKVEEYP FRRVPKVAFM FLTRGPLPLS PLWEEFLKGH EDLYSIYVHT IPGYNLNVSQ SSAFYGRQIP NKVVRWGSIS MVDAEKRLLA
101: NALLDFSNER FVLLSESCIP VYGFPTVYKY LIRSAHSFVQ SFDENSPLGR GRYNHRMAPD IVLSQWRKGS EWLELSRSLA VEVVADFKYH FLFRKYCQPP
201: CYADEHYFPT YFNMFHGALI ANRSITWVDW SRGESKICKY NSGATTMCFL FARKFASDAL ELLLNLTSAV MSS
101: NALLDFSNER FVLLSESCIP VYGFPTVYKY LIRSAHSFVQ SFDENSPLGR GRYNHRMAPD IVLSQWRKGS EWLELSRSLA VEVVADFKYH FLFRKYCQPP
201: CYADEHYFPT YFNMFHGALI ANRSITWVDW SRGESKICKY NSGATTMCFL FARKFASDAL ELLLNLTSAV MSS
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.