Factsheet for GSMUA_Achr4P05750_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	63.43	83.78
GSMUA_Achr4P12520_001	Banana	golgi	82.61	82.61
GSMUA_Achr11P...	Banana	cytosol	60.61	81.44
GSMUA_Achr10P...	Banana	cytosol	57.03	79.36
GSMUA_Achr5P24160_001	Banana	mitochondrion	67.26	74.93
Zm00001d015429_P004	Maize	golgi	69.82	72.41
Os06t0661900-01	Rice	golgi	69.31	70.94
TraesCS7B01G392700.1	Wheat	golgi	68.54	70.9
HORVU7Hr1G109810.1	Barley	golgi	68.54	70.9
EES04616	Sorghum	golgi	69.82	70.73
TraesCS7D01G476000.1	Wheat	golgi	68.29	70.63
TraesCS7A01G489600.1	Wheat	golgi	68.29	70.63
Zm00001d053763_P001	Maize	golgi	69.57	70.1
KXG20537	Sorghum	mitochondrion	67.26	69.58
Zm00001d036668_P004	Maize	plasma membrane	66.75	69.05
Os02t0175500-01	Rice	golgi	68.54	68.72
Os06t0700500-01	Rice	golgi	65.22	68.55
KXG20769	Sorghum	golgi	63.94	67.2
TraesCS6D01G143800.1	Wheat	golgi	66.75	66.92
Zm00001d014668_P001	Maize	plasma membrane	63.43	66.67
Zm00001d036482_P001	Maize	plasma membrane	63.68	66.58
HORVU7Hr1G097200.3	Barley	golgi	62.92	66.49
HORVU6Hr1G030990.4	Barley	golgi	66.24	66.41
TraesCS6A01G154200.1	Wheat	golgi	66.24	66.41
TraesCS6B01G181900.1	Wheat	golgi	65.98	66.15
TraesCS7D01G412700.1	Wheat	golgi	62.15	65.68
TraesCS7A01G419900.1	Wheat	golgi	62.15	65.68
TraesCS7B01G320800.1	Wheat	golgi	61.89	65.41
Zm00001d046936_P002	Maize	golgi	64.71	63.73
GSMUA_Achr8P29190_001	Banana	cytosol	31.97	45.79
GSMUA_Achr7P23520_001	Banana	cytosol	33.25	44.07
GSMUA_Achr6P09800_001	Banana	cytosol	30.69	43.17
GSMUA_Achr8P31730_001	Banana	cytosol	29.92	42.7
GSMUA_Achr1P04580_001	Banana	cytosol	29.41	38.85
GSMUA_Achr1P04590_001	Banana	cytosol	29.41	37.95
GSMUA_Achr8P08460_001	Banana	golgi	34.02	36.64
GSMUA_Achr1P14240_001	Banana	golgi	33.5	36.59
GSMUA_Achr3P25730_001	Banana	golgi	31.97	34.82
GSMUA_Achr5P01370_001	Banana	golgi	31.46	33.61
GSMUA_Achr2P14170_001	Banana	mitochondrion	30.43	32.43
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	31.97	31.41
GSMUA_Achr9P21910_001	Banana	golgi	30.95	31.35
GSMUA_Achr3P28930_001	Banana	golgi	29.67	30.29

Protein Annotations

EnsemblPlants:GSMUA_Achr4P05750_001	EnsemblPlants:GSMUA_Achr4T05750_001	EnsemblPlantsGene:GSMUA_Achr4G05750_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF15	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000294B5A3	UniProt:M0SLE2
MapMan:35.1	:	:	:	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G05750_001]

Coordinates

chr4:+:4441503..4450746

Molecular Weight (calculated)

45609.9 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.242

Length

391 amino acids

Sequence
(BLAST)

001: MKIPQAWQFR NGNVQIIPVQ FRRSRSRRPH WIIILICLVC VSLIGAYVYP PRRYSACYFF SSSICSPLKD LLPPTARVLT DDEFASNVLI KNILSMPSVE
101: LKNSKIAFMF LTPGSLPFER LWEKFFLGHE GRFSIYVHAS REKPVHVSPL FDGRDIQSSK VVWGKISMVD AEKRLLANAI QDPENQHFVL LSDSCVPLHN
201: FDYVYNYLMG TNVSFIDSFR DPGPHGNARY TEHMLPEIEE DDFRKALEWF SMKRRHALIV LADNLYYTKF KLYCKPGFDG RNCYADEHYL PTLFNMVDPI
301: GMANWSVTHV DWSEGKWHPK AYRAQDVTYE LLKNITSIDE NYHITSDEKK VATQKPCLWN GMKRPCYLFA RKFYPEALDN LIHLFSNYTV I

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.