Factsheet for GSMUA_Achr7P08690_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
plastid 2
endoplasmic reticulum 3
extracellular 3
mitochondrion 2
cytosol 2
plasma membrane 3
golgi 4
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	81.76	83.16
GSMUA_Achr10P...	Banana	cytosol	74.66	78.65
GSMUA_Achr4P12520_001	Banana	golgi	86.82	65.73
GSMUA_Achr4P05750_001	Banana	golgi	83.78	63.43
GSMUA_Achr5P24160_001	Banana	mitochondrion	74.66	62.96
Zm00001d015429_P004	Maize	golgi	75.68	59.42
Os06t0661900-01	Rice	golgi	76.01	58.9
Zm00001d036668_P004	Maize	plasma membrane	73.99	57.94
HORVU7Hr1G109810.1	Barley	golgi	73.99	57.94
TraesCS7D01G476000.1	Wheat	golgi	73.31	57.41
TraesCS7A01G489600.1	Wheat	golgi	73.31	57.41
Os06t0700500-01	Rice	golgi	71.96	57.26
EES04616	Sorghum	golgi	74.66	57.25
KXG20537	Sorghum	mitochondrion	72.97	57.14
Zm00001d053763_P001	Maize	golgi	74.66	56.96
TraesCS7B01G392700.1	Wheat	golgi	72.64	56.88
KXG20769	Sorghum	golgi	70.95	56.45
Zm00001d036482_P001	Maize	plasma membrane	70.95	56.15
TraesCS7D01G412700.1	Wheat	golgi	69.59	55.68
HORVU7Hr1G097200.3	Barley	golgi	69.59	55.68
TraesCS7B01G320800.1	Wheat	golgi	69.59	55.68
TraesCS7A01G419900.1	Wheat	golgi	69.59	55.68
Os02t0175500-01	Rice	golgi	72.97	55.38
Zm00001d014668_P001	Maize	plasma membrane	69.59	55.38
TraesCS6A01G154200.1	Wheat	golgi	70.61	53.59
TraesCS6B01G181900.1	Wheat	golgi	70.61	53.59
HORVU6Hr1G030990.4	Barley	golgi	70.27	53.33
TraesCS6D01G143800.1	Wheat	golgi	70.27	53.33
Zm00001d046936_P002	Maize	golgi	70.27	52.39
GSMUA_Achr8P29190_001	Banana	cytosol	40.54	43.96
GSMUA_Achr6P09800_001	Banana	cytosol	40.54	43.17
GSMUA_Achr8P31730_001	Banana	cytosol	38.51	41.61
GSMUA_Achr7P23520_001	Banana	cytosol	40.54	40.68
GSMUA_Achr1P04580_001	Banana	cytosol	38.51	38.51
GSMUA_Achr1P04590_001	Banana	cytosol	38.18	37.29
GSMUA_Achr1P14240_001	Banana	golgi	39.86	32.96
GSMUA_Achr8P08460_001	Banana	golgi	40.2	32.78
GSMUA_Achr3P25730_001	Banana	golgi	38.18	31.48
GSMUA_Achr2P14170_001	Banana	mitochondrion	38.51	31.06
GSMUA_Achr9P21910_001	Banana	golgi	38.18	29.27
GSMUA_Achr5P01370_001	Banana	golgi	36.15	29.23
GSMUA_Achr3P28930_001	Banana	golgi	37.16	28.72
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	37.84	28.14

Protein Annotations

EnsemblPlants:GSMUA_Achr7P08690_001	EnsemblPlants:GSMUA_Achr7T08690_001	EnsemblPlantsGene:GSMUA_Achr7G08690_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF29
PFAM:PF02485	UniParc:UPI000296D946	UniProt:M0TFV9	MapMan:35.1	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G08690_001]

Coordinates

chr7:+:6752132..6761340

Molecular Weight (calculated)

34613.4 Da

IEP (calculated)

6.840

GRAVY (calculated)

-0.329

Length

296 amino acids

Sequence
(BLAST)

001: MPLVWPKHPK IAFMFLTPGS LPFEKLWETF FLGHEGRFSI YIHASREKPV HVSPLFVDRD IRSAKVVWGK ISMVEAEKRL LANALQDPDN QHFVLLSDSC
101: VPLHNFDYVY SYLMGTNVSY IDTFWDPGPH GNARYTEHML PEIEEKDFRK GSQWFSMKRQ HALIVMADSL YFTKFKLYCK PGFDGRNCYA DEHYLPTLFT
201: MIDPNGIANW SVTHVDWSEG KWHPKSYRAE EVTYELLKNI TSIDESYHIT SDEKKVEMLT PCVWNGSKRP CYLFARKFLP EGLDNLMQLF SNYAIV

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.