Factsheet for TraesCS7A01G419900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G412700.1	Wheat	golgi	99.73	99.73
TraesCS7B01G320800.1	Wheat	golgi	99.46	99.46
HORVU7Hr1G097200.3	Barley	golgi	97.84	97.84
Os06t0700500-01	Rice	golgi	88.38	87.9
KXG20769	Sorghum	golgi	85.68	85.22
Zm00001d036482_P001	Maize	plasma membrane	85.14	84.22
Zm00001d014668_P001	Maize	plasma membrane	84.05	83.6
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	55.68	69.59
GSMUA_Achr11P...	Banana	cytosol	52.97	67.35
GSMUA_Achr4P12520_001	Banana	golgi	67.03	63.43
TraesCS7A01G489600.1	Wheat	golgi	64.32	62.96
GSMUA_Achr4P05750_001	Banana	golgi	65.68	62.15
TraesCS2A01G430900.2	Wheat	mitochondrion	62.43	59.84
TraesCS6A01G154200.1	Wheat	golgi	59.73	56.67
TraesCS3A01G037000.1	Wheat	cytosol	31.35	37.42
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	38.65	36.57
TraesCS3A01G036900.1	Wheat	cytosol	29.19	36.36
TraesCS3A01G386500.1	Wheat	golgi	38.11	36.06
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	35.95	32.84
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	35.95	31.67
TraesCS1A01G022400.1	Wheat	golgi, vacuole	30.0	31.53
TraesCS1A01G114000.1	Wheat	golgi	32.43	30.77
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	32.43	30.53
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	32.16	25.48

Protein Annotations

EnsemblPlants:TraesCS7A01G419900.1	EnsemblPlantsGene:TraesCS7A01G419900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF12	PFAM:PF02485
SignalP:SignalP-TM	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:611488421..611494157

Molecular Weight (calculated)

42929.5 Da

IEP (calculated)

8.366

GRAVY (calculated)

-0.295

Length

370 amino acids

Sequence
(BLAST)

001: MAPRNRTSSR RPLWVIVLIA FVCAIVTGAY LYKPQHYTGC YLSNSCGSQP PLEPVRVYTD DEIAARAVMR DLVLSQPVQS KNPKIAFMFL TPSSLPFEKL
101: WEKFFMGHED RYTIYVHASR EKTVHASPIF AGRDIRSEKV VWGTVTMIDA ERRLLANALQ DADNQHFVLL SESCVPLHNF DYVYSYLMET NISFVDSFDD
201: PGPHGAGRYS EHMLPEIIKR DWRKGAQWFT VKRQHAVLIL VDTLYYGKFK RYCKPGNEYH NCYSDEHYLP TLFNMVDPTG IANWSVTRVD WSEGKWHPKV
301: YRAVDTSFEL LKSIASIDES VHVTSNAKHE MQRRPCMWNG MKRPCYLFAR KFYPEALDTL MNIFSNFTVI

Best Arabidopsis Sequence Match ( AT4G25870.1 )
(BLAST)

001: MGETQKILQG PRHHTSLKKP LWVVLTVSVT SMLLICTHMY PKHGKSSSCH GLYSTRGCED ALSKWLPVHV RKFTDEEIAA RAVVRDILRT PPFITNNSKI
101: AFLFLTPGTL PFEKLWDEFF KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VSALEDPDNQ HFVLVSESCI PLHTFDYTYR
201: YLLYSNVSFI ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFN MIDPMGISNW
301: SVTFVDWSER RWHPKTYGGN EISLEFMKNV TSEDMSVHVT SVGKHGDELH WPCTWNGIKR PCYLFARKFH PDTLDTLVNL FPNYTNTAV

Arabidopsis Description

At4g25870 [Source:UniProtKB/TrEMBL;Acc:Q9SVZ8]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.