Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G022300.1 | Wheat | golgi, plasma membrane, vacuole | 92.33 | 83.12 |
| TraesCS1B01G026200.1 | Wheat | golgi | 92.61 | 82.74 |
| TraesCS3A01G037000.1 | Wheat | cytosol | 38.64 | 43.87 |
| TraesCS3A01G036900.1 | Wheat | cytosol | 36.08 | 42.76 |
| TraesCS3A01G386500.1 | Wheat | golgi | 39.77 | 35.81 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 38.92 | 35.04 |
| TraesCS5A01G010800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome, plastid | 38.92 | 32.62 |
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 37.5 | 32.59 |
| TraesCS7A01G489600.1 | Wheat | golgi | 32.67 | 30.42 |
| TraesCS7A01G419900.1 | Wheat | golgi | 31.53 | 30.0 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 39.77 | 29.98 |
| TraesCS2A01G430900.2 | Wheat | mitochondrion | 32.39 | 29.53 |
| TraesCS6A01G154200.1 | Wheat | golgi | 30.4 | 27.44 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 28.98 | 25.95 |
| TraesCS1A01G114000.1 | Wheat | golgi | 27.84 | 25.13 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G022400.1 | EnsemblPlantsGene:TraesCS1A01G022400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF7 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:10748846..10751344
Molecular Weight (calculated)
38917.7 Da
IEP (calculated)
8.855
GRAVY (calculated)
-0.074
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKPWGILSR FLLFSVAFML GMASTFLLQS LLPTTGTEIW LASADLSAAP TSAPPALVLR PPLPQQLERV SGGGNESERI VMLHNMTDNE LLLRASMAPR
101: IKGISSLVPP APKVAFMFLV RGELPLAPLW ERFFHGHTAL FSVYVHPDPT YLGSPEKGSV FYGRRVPSKE ARWGKSSIVE AERRLLANAL LDATNQHFVL
201: LSETCAPLYN FTTVYSYLAH SAGATSFADL FDTQRSRGRY RPAMAPTVTL ANWRKGSQWF ATDRGLALEV IGDVTYFPVF QRHCNGPCIM DEHYLPTFIA
301: ASKWHGNANR TLTFTQWTRG PHPDSYNDVS VDLLQGMRNH GNCSDGGGTT SL
101: IKGISSLVPP APKVAFMFLV RGELPLAPLW ERFFHGHTAL FSVYVHPDPT YLGSPEKGSV FYGRRVPSKE ARWGKSSIVE AERRLLANAL LDATNQHFVL
201: LSETCAPLYN FTTVYSYLAH SAGATSFADL FDTQRSRGRY RPAMAPTVTL ANWRKGSQWF ATDRGLALEV IGDVTYFPVF QRHCNGPCIM DEHYLPTFIA
301: ASKWHGNANR TLTFTQWTRG PHPDSYNDVS VDLLQGMRNH GNCSDGGGTT SL
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.