Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G022300.1 | Wheat | golgi, plasma membrane, vacuole | 95.43 | 96.16 |
| TraesCS1A01G022400.1 | Wheat | golgi, vacuole | 82.74 | 92.61 |
| TraesCS3B01G047000.1 | Wheat | plastid | 43.91 | 42.72 |
| TraesCS3B01G046900.1 | Wheat | golgi | 42.13 | 42.03 |
| TraesCS3B01G478200.1 | Wheat | mitochondrion | 36.04 | 40.23 |
| TraesCS3B01G418600.1 | Wheat | golgi | 38.32 | 39.22 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 38.58 | 38.78 |
| TraesCS5B01G008600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 38.32 | 36.39 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 37.06 | 36.05 |
| TraesCS2B01G616400.1 | Wheat | golgi | 37.31 | 35.17 |
| TraesCS7B01G392700.1 | Wheat | golgi | 32.23 | 33.6 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 39.09 | 33.19 |
| TraesCS7B01G320800.1 | Wheat | golgi | 30.71 | 32.7 |
| TraesCS2B01G452200.4 | Wheat | mitochondrion | 30.71 | 31.84 |
| TraesCS6B01G181900.1 | Wheat | golgi | 29.95 | 30.26 |
| TraesCS1B01G134300.1 | Wheat | golgi | 27.16 | 27.44 |
| TraesCS3B01G291600.1 | Wheat | plastid | 28.43 | 27.05 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G026200.1 | EnsemblPlantsGene:TraesCS1B01G026200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF7 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:12785194..12787715
Molecular Weight (calculated)
43438.4 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.072
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPQPRSAM VKPWGILSRF LLFSVAFMLG MASTFLLQSL LPTTGTVIWL ASADLSAAPT SAPPGLVLGP PLPQELGDGD KKESGGGGGD ESGGMVMLHN
101: MTDDQLLLRA SMAPRIKGIS LLVPPAPKVA FMFLVRGELP LAPLWERFFH GHTALFSVYV HPDPTYLSSP EKGSVFYGRR VPSKEARWGK SSIVEAERRL
201: LASALLDAMN QHFVLLSETC VPLYNFTTVY FYLTQYAGAT SFVDHFDTQR SRGRYRPAMA PTVTLANWRK GSQWFATDRG LALEVISDVT YFPVFQRHSN
301: GPCIMDEHYL PTFIAASKWH GNANRTLTFT QWTRGPHPDS YNDVSVDLLQ GMRNHGNCSD GGGTTSLCYL FARKFPSGAL PELLRLAPRV MRFG
101: MTDDQLLLRA SMAPRIKGIS LLVPPAPKVA FMFLVRGELP LAPLWERFFH GHTALFSVYV HPDPTYLSSP EKGSVFYGRR VPSKEARWGK SSIVEAERRL
201: LASALLDAMN QHFVLLSETC VPLYNFTTVY FYLTQYAGAT SFVDHFDTQR SRGRYRPAMA PTVTLANWRK GSQWFATDRG LALEVISDVT YFPVFQRHSN
301: GPCIMDEHYL PTFIAASKWH GNANRTLTFT QWTRGPHPDS YNDVSVDLLQ GMRNHGNCSD GGGTTSLCYL FARKFPSGAL PELLRLAPRV MRFG
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.