Subcellular Localization
min:
: max
Winner_takes_all: cytosol, golgi, peroxisome
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 99.51 | 99.51 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 98.77 | 98.77 |
| HORVU7Hr1G076790.5 | Barley | golgi | 95.8 | 94.87 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 84.2 | 83.78 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 85.19 | 83.74 |
| Zm00001d035039_P001 | Maize | plasma membrane | 85.19 | 83.33 |
| TraesCS2B01G616400.1 | Wheat | golgi | 67.16 | 65.07 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 61.23 | 62.31 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 54.81 | 58.58 |
| KRH26270 | Soybean | golgi | 55.31 | 58.49 |
| CDY31036 | Canola | golgi | 54.07 | 58.09 |
| CDX93443 | Canola | golgi | 54.57 | 57.55 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 55.8 | 57.36 |
| PGSC0003DMT400063986 | Potato | golgi | 55.8 | 56.93 |
| CDX94911 | Canola | golgi | 54.07 | 56.88 |
| CDY20644 | Canola | golgi | 54.32 | 56.41 |
| Solyc01g103150.2.1 | Tomato | golgi | 54.81 | 55.92 |
| TraesCS3B01G418600.1 | Wheat | golgi | 52.59 | 55.32 |
| Bra018450.1-P | Field mustard | golgi | 54.81 | 54.95 |
| AT1G10280.1 | Thale cress | golgi | 55.31 | 54.37 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 55.56 | 54.35 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 44.2 | 45.66 |
| TraesCS3B01G478200.1 | Wheat | mitochondrion | 39.01 | 44.76 |
| TraesCS5B01G008600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 41.23 | 40.24 |
| TraesCS3B01G047000.1 | Wheat | plastid | 37.53 | 37.53 |
| TraesCS3B01G046900.1 | Wheat | golgi | 36.3 | 37.22 |
| TraesCS1B01G026200.1 | Wheat | golgi | 36.05 | 37.06 |
| TraesCS7B01G320800.1 | Wheat | golgi | 32.84 | 35.95 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 40.0 | 34.91 |
| TraesCS7B01G392700.1 | Wheat | golgi | 31.85 | 34.13 |
| TraesCS2B01G452200.4 | Wheat | mitochondrion | 31.36 | 33.42 |
| TraesCS6B01G181900.1 | Wheat | golgi | 31.85 | 33.08 |
| TraesCS1B01G134300.1 | Wheat | golgi | 29.14 | 30.26 |
| TraesCS3B01G291600.1 | Wheat | plastid | 28.89 | 28.26 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G221700.1 | EnsemblPlantsGene:TraesCS7B01G221700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF3 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:413579181..413581044
Molecular Weight (calculated)
45914.5 Da
IEP (calculated)
8.262
GRAVY (calculated)
-0.259
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGDSKPMLK SRGGGGGGGG ADEEGDYFPN TPRKDWSTGL LKLVTAMVIF MAGVVIGLSV SANVSRYYYN SHTELFFPTA TYSSCDRRGA TGDCGPGFKA
101: FVHPPTLAHS MTDDELFWRA TLVPTAEEFP FQRVPKVAFL FMTRGPLPFA PLWERFFHGH QGLFSVYLHT IPDYKLNVSK TSPFYGRQIP SEEVSWGSIT
201: LVDAEKRLLA NALLDFSNER FVLLSESCIP VFNFPTVYEY LINSEQSFVE SYNIDTPQSA GRYNRRMAPH ILPEQWRKGS EWFELNRELA VRVVADYKYY
301: SIFRKHCRPS CYPDEHYIPT YLHLFHGSLN ANRTITWVDW SRGGPHPARY GAGNINVDFI KAIRNNGTQC LYNSKHTSVC YLFARKFAPS ALGPLMNLTS
401: TVLDF
101: FVHPPTLAHS MTDDELFWRA TLVPTAEEFP FQRVPKVAFL FMTRGPLPFA PLWERFFHGH QGLFSVYLHT IPDYKLNVSK TSPFYGRQIP SEEVSWGSIT
201: LVDAEKRLLA NALLDFSNER FVLLSESCIP VFNFPTVYEY LINSEQSFVE SYNIDTPQSA GRYNRRMAPH ILPEQWRKGS EWFELNRELA VRVVADYKYY
301: SIFRKHCRPS CYPDEHYIPT YLHLFHGSLN ANRTITWVDW SRGGPHPARY GAGNINVDFI KAIRNNGTQC LYNSKHTSVC YLFARKFAPS ALGPLMNLTS
401: TVLDF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.