Factsheet for TraesCS3B01G046900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G042700.1	Wheat	golgi	97.22	96.48
TraesCS3A01G037000.1	Wheat	cytosol	75.19	95.81
HORVU3Hr1G007160.1	Barley	cytosol, golgi	50.63	92.59
Os01t0133700-00	Rice	cytosol	34.68	61.99
TraesCS3B01G047000.1	Wheat	plastid	58.99	57.53
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	53.67	50.72
TraesCS1B01G026200.1	Wheat	golgi	42.03	42.13
TraesCS3B01G478200.1	Wheat	mitochondrion	37.47	41.93
TraesCS3B01G418600.1	Wheat	golgi	37.72	38.7
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	38.23	38.52
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	40.0	38.07
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	37.22	36.3
TraesCS2B01G616400.1	Wheat	golgi	38.23	36.12
TraesCS7B01G320800.1	Wheat	golgi	31.14	33.24
TraesCS7B01G392700.1	Wheat	golgi	31.39	32.8
TraesCS2B01G452200.4	Wheat	mitochondrion	30.13	31.32
TraesCS6B01G181900.1	Wheat	golgi	30.63	31.03
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	35.95	30.6
TraesCS1B01G134300.1	Wheat	golgi	25.82	26.15
TraesCS3B01G291600.1	Wheat	plastid	26.33	25.12

Protein Annotations

EnsemblPlants:TraesCS3B01G046900.1	EnsemblPlantsGene:TraesCS3B01G046900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF11	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:+:23929157..23930599

Molecular Weight (calculated)

44397.3 Da

IEP (calculated)

7.943

GRAVY (calculated)

-0.246

Length

395 amino acids

Sequence
(BLAST)

001: MKKPMAAGSG RVNVVPMLLV FCLAYVLGLV SNVTFDNFYV HNFLSPLMLP ASRLQTPPTT PEAVPCILPP SLPPPEPTPP SLERRRMESG SGALHNMTDE
101: ELMWRASMVP RIKSTPKHGI VPKVAFLFLV RGDVPLRPLW DKFFEGHEGL YSIYVHTSPD YTGSPPPDSP FYGRIIPSQR TSWGNINLMD AERRLLGNAL
201: LDVANARFAL LSESCIPILG FPVLYAYLTG SNTSFVDSFD RRDGRARHRE FFAERNISLA QWRKGAQWFE MDRAFALEVV SDETYYGPVF RNGKHGVRNL
301: EEHYPMTLAS LLGWGSRNAN RTVTYSDWRH PVGQHPKSHN GSEVTEELFE EMRRGYGDCY YNGGVAEVCA VFARKFKPEA LDALLDLAPK LFAPA

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.