Factsheet for TraesCS3D01G042700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G046900.1	Wheat	golgi	96.48	97.22
TraesCS3A01G037000.1	Wheat	cytosol	75.38	96.77
HORVU3Hr1G007160.1	Barley	cytosol, golgi	50.5	93.06
Os01t0133700-00	Rice	cytosol	33.92	61.09
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	58.29	57.71
TraesCS3D01G042800.2	Wheat	golgi, plasma membrane, plastid	60.05	57.45
TraesCS3D01G043100.1	Wheat	plastid	59.05	55.82
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	53.02	50.48
TraesCS1D01G394500.1	Wheat	mitochondrion	32.66	44.52
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	40.2	40.92
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	38.69	39.29
TraesCS3D01G379500.1	Wheat	golgi	37.19	37.95
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	36.68	36.05
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	37.44	35.82
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	38.94	35.23
TraesCS7D01G412700.1	Wheat	golgi	30.65	32.97
TraesCS7D01G476000.1	Wheat	golgi	30.65	32.28
TraesCS6D01G143800.1	Wheat	golgi	31.41	32.05
TraesCS2D01G428700.2	Wheat	mitochondrion	29.15	30.53
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	26.13	26.4
TraesCS1D01G115700.1	Wheat	golgi	25.63	26.22

Protein Annotations

EnsemblPlants:TraesCS3D01G042700.1	EnsemblPlantsGene:TraesCS3D01G042700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF11	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:16363397..16364809

Molecular Weight (calculated)

44598.4 Da

IEP (calculated)

7.943

GRAVY (calculated)

-0.247

Length

398 amino acids

Sequence
(BLAST)

001: MKKPMAAGSG RVNVVPMLLV FCLAYVLGLV SNVTFENFYV HNFLSPLMLP ASRLQTPPTT PEAVPCILPP SLPPPEPTPP PPASLERRRM ESGSGAMHNM
101: TDEELLWRAS MVPRIKSTPK HGIVPKVAFL FLVRGDVPLR PLWDKFFEGH EGLYSIYVHT SPDYTGSAPP DSPFYGRIIP SQRTSWGNIN LMDAERRLLG
201: NALLDVANAR FALLSESCIP ILGFPALYAY LTGSNTSFVD SFDRRDGRAR HREFFAERNI SLAQWRKGAQ WFEMDRAFAL EVVSDETYYG PVFRNGKHGV
301: RNLEEHYPMT LASVLGWGAR NSNRTVTYSD WRHPVGQHPK SHNGSEITEE LFEEMRRGYG DCYYNGGVAE VCAVFARKFK PEALDALLDL APKLFASG

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.