Factsheet for TraesCS5D01G015600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	89.32	93.57
TraesCS3B01G478200.1	Wheat	mitochondrion	74.09	92.35
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	86.36	91.57
HORVU5Hr1G077980.1	Barley	cytosol, plastid	37.05	89.07
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	81.14	87.07
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	74.32	86.51
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	80.0	84.21
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	62.05	67.08
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	60.91	65.85
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	58.41	64.9
Zm00001d031187_P002	Maize	plastid	58.64	64.82
TraesCS1D01G394500.1	Wheat	mitochondrion	34.09	51.37
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	45.68	51.28
GSMUA_Achr1P04580_001	Banana	cytosol	33.64	50.0
GSMUA_Achr1P04590_001	Banana	cytosol	33.18	48.18
TraesCS3D01G379500.1	Wheat	golgi	38.18	43.08
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	38.86	42.22
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	38.41	40.62
TraesCS3D01G042700.1	Wheat	golgi	35.23	38.94
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	35.0	38.31
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	33.86	38.11
TraesCS3D01G043100.1	Wheat	plastid	35.0	36.58
TraesCS3D01G042800.2	Wheat	golgi, plasma membrane, plastid	34.32	36.3
TraesCS7D01G412700.1	Wheat	golgi	30.45	36.22
TraesCS7D01G476000.1	Wheat	golgi	29.55	34.39
TraesCS2D01G428700.2	Wheat	mitochondrion	29.55	34.21
TraesCS6D01G143800.1	Wheat	golgi	30.0	33.85
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	25.91	28.93
TraesCS1D01G115700.1	Wheat	golgi	25.0	28.28

Protein Annotations

EnsemblPlants:TraesCS5D01G015600.1	EnsemblPlantsGene:TraesCS5D01G015600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:-:9012655..9014840

Molecular Weight (calculated)

48496.2 Da

IEP (calculated)

10.152

GRAVY (calculated)

-0.209

Length

440 amino acids

Sequence
(BLAST)

001: MGATSSSKRL QRIDLLYAFR GGMPGGGGGG GGGAAAVVVD GKDGYAAPAR AAPRSFPAKL LRPVLLSAVL ATGFLAAALL MFFGGASSYY RLPRLAVPDA
101: LLPAPTCDQE DGDQQGGAAQ RWWARPPARS AWHNMSEEEL LWAASFEPRA HQRRPPGRRG RTPKVAFLFL TRGPLPLAPL WERFFNSTGT KGRELFSVYV
201: HTTPGYRLDF PPSSPFHRRQ VPSKPTRWGN VNVVDAERRL LANALLDFSN ERFVLVSESC IPLYPLPVVH AYLTRSRHSF VGAFDDPSPH GRGRYRAGLA
301: PDVTLSQWRK GAQWFEMDRR LAVFVIADER YYPRFRTECR APCYVDEHYL PTVLSIEAPT QIANRTVTLV DWSRGGAHPA TFGAADVTED FLGMLVGKKG
401: NAERCMYNGQ PVEVCFLFAR KFAPAALPQL LSLSSKILGY

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.