Factsheet for HORVU5Hr1G077980.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G478200.1	Wheat	mitochondrion	86.89	45.04
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	100.0	43.78
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	96.72	43.17
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	89.07	39.28
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	78.69	38.1
HORVU1Hr1G085260.1	Barley	cytosol	49.73	37.92
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	86.89	37.86
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	89.07	37.05
HORVU3Hr1G007160.1	Barley	cytosol, golgi	43.72	37.04
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	69.95	32.32
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	67.76	30.47
Zm00001d031187_P002	Maize	plastid	65.57	30.15
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	66.67	29.98
GSMUA_Achr1P04580_001	Banana	cytosol	45.36	28.04
GSMUA_Achr1P04590_001	Banana	cytosol	44.81	27.06
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	54.64	25.0
HORVU3Hr1G081930.2	Barley	golgi	48.09	22.51
HORVU7Hr1G076790.5	Barley	golgi	47.54	21.27
HORVU2Hr1G100480.3	Barley	cytosol	37.7	21.23
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	48.09	21.1
HORVU7Hr1G097200.3	Barley	golgi	42.08	20.81
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	50.27	19.57
HORVU6Hr1G030990.4	Barley	golgi	40.44	18.97
HORVU7Hr1G109810.1	Barley	golgi	38.8	18.78
HORVU3Hr1G065000.4	Barley	cytosol	31.15	17.65
HORVU0Hr1G039960.6	Barley	golgi	15.85	11.15

Protein Annotations

EnsemblPlants:HORVU5Hr1G077980.1	EnsemblPlantsGene:HORVU5Hr1G077980	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28	PFAM:PF02485
UniParc:UPI000B47442E	UniProt:A0A287RWR1	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:554322342..554322974

Molecular Weight (calculated)

20720.8 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.193

Length

183 amino acids

Sequence
(BLAST)

001: ESCIPLYPLP VVHAYLTRSR HSFVGAFDEP SQHGRGRYRV GLAPDVTLAQ WRKGAQWFEM DRHLAVYVIA DDRYYPRFRN ECRAPCYVDE HYLPTVLSIV
101: APKQIANRTI TLVDWSRGGA HPATFGTPDV TEDFLGRLVG KKGSPERCMY NGQSIEVCFL FARKFAPVAL PQLLSLSSEI LGY

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.