Factsheet for HORVU1Hr1G085240.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G085260.1	Barley	cytosol	42.98	84.17
TraesCS1D01G394500.1	Wheat	mitochondrion	48.3	77.74
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	76.38	77.37
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	75.53	76.02
PGSC0003DMT400037735	Potato	cytosol	25.96	59.22
Os02t0327500-01	Rice	golgi	52.55	56.26
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	50.85	53.59
OQU84731	Sorghum	plastid	53.19	52.08
Zm00001d053393_P002	Maize	golgi, plastid	49.57	51.89
HORVU5Hr1G077980.1	Barley	cytosol, plastid	19.57	50.27
VIT_17s0000g03400.t01	Wine grape	cytosol	31.06	49.32
GSMUA_Achr6P09800_001	Banana	cytosol	28.72	48.56
VIT_17s0000g03410.t01	Wine grape	cytosol	30.43	48.47
PGSC0003DMT400014396	Potato	cytosol	28.94	45.95
KRH60391	Soybean	golgi, plastid	33.83	42.29
HORVU3Hr1G007160.1	Barley	cytosol, golgi	19.36	42.13
PGSC0003DMT400037733	Potato	golgi	34.04	41.56
Solyc05g009120.2.1	Tomato	nucleus	34.47	41.54
KRH41690	Soybean	golgi	32.55	41.13
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	34.47	40.0
CDX73016	Canola	mitochondrion	29.36	39.77
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	29.57	39.71
Solyc05g009110.1.1	Tomato	golgi	32.34	39.48
Solyc12g036400.1.1	Tomato	extracellular	32.98	37.62
PGSC0003DMT400013770	Potato	golgi	32.98	37.62
KRH35920	Soybean	golgi, plasma membrane	33.19	37.59
KRG90861	Soybean	golgi, plasma membrane	33.19	37.05
KRH38159	Soybean	golgi	33.62	36.16
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	31.7	35.65
KRH48513	Soybean	golgi	33.83	35.57
KRH39163	Soybean	golgi	33.83	35.26
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	31.91	35.21
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	29.15	34.25
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	29.79	33.57
HORVU7Hr1G076790.5	Barley	golgi	29.15	33.5
HORVU3Hr1G081930.2	Barley	golgi	27.45	32.99
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	27.87	31.95
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	27.87	31.34
HORVU2Hr1G100480.3	Barley	cytosol	21.06	30.46
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	24.47	30.42
HORVU7Hr1G097200.3	Barley	golgi	22.13	28.11
HORVU7Hr1G109810.1	Barley	golgi	22.34	27.78
HORVU6Hr1G030990.4	Barley	golgi	22.55	27.18
HORVU3Hr1G065000.4	Barley	cytosol	16.6	24.15
HORVU0Hr1G039960.6	Barley	golgi	13.19	23.85
CDX73017	Canola	cytosol	0.43	14.29

Protein Annotations

EnsemblPlants:HORVU1Hr1G085240.4	EnsemblPlantsGene:HORVU1Hr1G085240	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	ncoils:Coil	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7
PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B479D82	UniProt:A0A287GKC5	MapMan:35.1

Description

No Description!

Coordinates

chrchr1H:-:535358462..535362280

Molecular Weight (calculated)

45516.7 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.139

Length

470 amino acids

Sequence
(BLAST)

001: MSAKKNHKQQ QQQRAVAQMV VAAAMATPCP TKTLFVALGF ALGIVATLSL MGSTGSSALP GAALELFFPS HPVNVSTEVR PRQPPRPVQV QPQAAPAVSA
101: SSPPPVPVAD AGISRHAALP VQPQTAPATG VSSPPSPPLV ADAGSDKKRA ALHENASTAE EEGGRRPVVD DDDDDRLMAL ASAAPRAVRV GAGGAPKVAF
201: LFLAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXEVK WGHISMVEAE RRLLAHALLD HSNARFILLS ESHVPLFDFP
301: TVYSYLINST KVYMESYDEP GGTGRGRYKR GMAPTITPWQ WRKGSQWFEM DRALAVDVVA DDIYFPVFKK LCKHNCYADE HYLPTFLHIR HPKAAAGRIV
401: TWVDWSHGGP HPSRFTRMEV TVDFLRWLRG GTTCEYNGRT TTICFLFARK FLPNSLTRFL RFAPKVMGFG

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.