Factsheet for HORVU5Hr1G078030.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, cytosol

Predictor Summary:

plastid 2
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome, plastid
Any Predictor:	cytosol, golgi, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G077980.1	Barley	cytosol, plastid	43.78	100.0
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	84.45	93.39
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	91.15	92.93
TraesCS3B01G478200.1	Wheat	mitochondrion	71.77	84.99
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	83.97	83.57
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	82.78	83.37
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	84.21	80.0
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	62.44	64.13
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	61.96	63.64
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	60.05	63.38
Zm00001d031187_P002	Maize	plastid	60.05	63.07
GSMUA_Achr1P04580_001	Banana	cytosol	35.17	49.66
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	47.13	49.25
HORVU1Hr1G085260.1	Barley	cytosol	27.51	47.92
GSMUA_Achr1P04590_001	Banana	cytosol	34.21	47.19
HORVU3Hr1G007160.1	Barley	cytosol, golgi	24.16	46.76
HORVU3Hr1G081930.2	Barley	golgi	38.76	41.43
HORVU7Hr1G076790.5	Barley	golgi	39.23	40.1
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	39.0	39.09
HORVU2Hr1G100480.3	Barley	cytosol	28.47	36.62
HORVU7Hr1G097200.3	Barley	golgi	31.58	35.68
HORVU7Hr1G109810.1	Barley	golgi	30.62	33.86
HORVU6Hr1G030990.4	Barley	golgi	31.34	33.59
HORVU0Hr1G039960.6	Barley	golgi	18.9	30.38
HORVU3Hr1G065000.4	Barley	cytosol	22.97	29.72
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	31.34	27.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G078030.1	EnsemblPlantsGene:HORVU5Hr1G078030	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28
PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B47DB05	UniProt:A0A287RWG4	MapMan:35.1

Description

No Description!

Coordinates

chrchr5H:-:554395934..554399368

Molecular Weight (calculated)

46789.0 Da

IEP (calculated)

9.694

GRAVY (calculated)

-0.285

Length

418 amino acids

Sequence
(BLAST)

001: MQAGGGAAAV VVVDGGKDGH ATPRTFPAKL LRPVLLSAVL ATGFLAAALL MFPGGASSYY RLPRLAAPDA LRPTPARHQQ RGEEELESQE SGAAERWWAR
101: PPARSAWHNM SEEELLWAAS FEPRAQHRRW PPGMPHRTPK VAFMFLTRGP LPLAPLWERF FNGTGAEGGR ERLFSVYVHT TPGFRLDFPP SSPFHRRQVP
201: SKATRWGDAN MVDAERRLLA NALLDFNNER FVLVSESCIP LYPLPVVHAY LTRSRHSFVG AFDEPSQHGR GRYRVGLAPD VTLAQWRKGA QWFEMDRHLA
301: VYVIADDRYY PRFRNECRAP CYVDEHYLPT VLSIVAPKQI ANRTITLVDW SRGGAHPATF GTPDVTEDFL GRLVGKKGSP ERCMYNGQSI EVCFLFARKF
401: APVALPQLLS LSSEILGY

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.