Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 99.07 | 81.22 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 96.9 | 79.64 |
| TraesCS3B01G291600.1 | Wheat | plastid | 98.14 | 76.57 |
| Os01t0695200-01 | Rice | plastid | 82.66 | 73.55 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 82.97 | 68.54 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 82.66 | 68.29 |
| Solyc02g036250.1.1 | Tomato | cytosol | 27.24 | 56.05 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 58.82 | 49.61 |
| KRH11480 | Soybean | mitochondrion | 57.89 | 49.6 |
| PGSC0003DMT400042390 | Potato | golgi | 56.35 | 48.53 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 56.66 | 48.16 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 57.28 | 47.93 |
| Solyc02g080970.2.1 | Tomato | plastid | 56.66 | 46.8 |
| CDY31228 | Canola | golgi | 52.32 | 45.68 |
| CDY24895 | Canola | mitochondrion | 52.63 | 45.58 |
| Bra034487.1-P | Field mustard | mitochondrion | 52.63 | 45.58 |
| AT1G62305.1 | Thale cress | golgi | 53.25 | 45.5 |
| CDY21023 | Canola | golgi | 52.94 | 45.48 |
| PGSC0003DMT400055283 | Potato | golgi | 52.01 | 45.16 |
| Bra016802.1-P | Field mustard | golgi | 52.32 | 44.95 |
| KRH36494 | Soybean | mitochondrion | 58.2 | 44.66 |
| CDY08638 | Canola | mitochondrion | 52.32 | 44.59 |
| Bra031797.1-P | Field mustard | cytosol | 45.2 | 43.2 |
| CDY34605 | Canola | golgi | 49.85 | 42.59 |
| AT1G11940.1 | Thale cress | golgi | 50.15 | 42.3 |
| HORVU0Hr1G039960.6 | Barley | golgi | 30.65 | 38.08 |
| CDY66259 | Canola | cytosol | 45.2 | 33.95 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 25.08 | 33.75 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 33.13 | 32.92 |
| HORVU3Hr1G007160.1 | Barley | cytosol, golgi | 21.98 | 32.87 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 17.65 | 31.15 |
| HORVU7Hr1G097200.3 | Barley | golgi | 33.75 | 29.46 |
| HORVU7Hr1G109810.1 | Barley | golgi | 31.58 | 26.98 |
| HORVU6Hr1G030990.4 | Barley | golgi | 32.2 | 26.67 |
| HORVU3Hr1G081930.2 | Barley | golgi | 32.2 | 26.6 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 33.44 | 25.9 |
| HORVU7Hr1G076790.5 | Barley | golgi | 32.2 | 25.43 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 30.65 | 24.75 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 29.41 | 23.17 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 29.72 | 22.97 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 24.77 | 21.16 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 24.15 | 16.6 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G065000.4 | EnsemblPlantsGene:HORVU3Hr1G065000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 | PFAM:PF02485 |
| UniParc:UPI000B484E54 | UniProt:A0A287LDK2 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:496317857..496327691
Molecular Weight (calculated)
37037.2 Da
IEP (calculated)
8.442
GRAVY (calculated)
-0.329
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: AGLPLDFLWD AFFRNGEEGR FSVYVHSAPG FVLDRTTTGS PYFYGRQLAR AVKVAWGEPT MVQAEKMLFA AALEDPANQR FVLLSDSCVP LYNFSYTYTY
101: LMGSPKSIVD SFTDKAEKRY NPNMSPVIRK DKWRKGSQWV MLIRKHAEVV VGDKHVFQVF RKHCKMVVTN ALLGQKLVNA RRLGFVFRQK QILKGAAQEE
201: HDCIPDEHYV QTLFSIKGLE DELERRTLTY TSWNQSSLDP KDKMTWHPTT FEYDAASPEQ INAIKSIDHV NYEVEHRTEW CQSNGTSVPC FLFARKFSYG
301: AAMHLLEDGA FGLLKSAQLL VNF
101: LMGSPKSIVD SFTDKAEKRY NPNMSPVIRK DKWRKGSQWV MLIRKHAEVV VGDKHVFQVF RKHCKMVVTN ALLGQKLVNA RRLGFVFRQK QILKGAAQEE
201: HDCIPDEHYV QTLFSIKGLE DELERRTLTY TSWNQSSLDP KDKMTWHPTT FEYDAASPEQ INAIKSIDHV NYEVEHRTEW CQSNGTSVPC FLFARKFSYG
301: AAMHLLEDGA FGLLKSAQLL VNF
001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
Arabidopsis Description
At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.