Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31228 Canola golgi 77.51 79.19
CDY21023 Canola golgi 78.04 78.46
AT1G11940.1 Thale cress golgi 78.04 77.02
CDY08638 Canola mitochondrion 63.23 63.06
CDY24895 Canola mitochondrion 62.17 63.0
CDY66259 Canola cytosol 70.37 61.86
VIT_10s0116g00980.t01 Wine grape golgi 57.67 57.37
Solyc02g036250.1.1 Tomato cytosol 22.75 54.78
KRH11480 Soybean mitochondrion 53.44 53.58
PGSC0003DMT400042390 Potato golgi 51.32 51.73
PGSC0003DMT400055283 Potato golgi 50.53 51.34
Solyc02g080970.2.1 Tomato plastid 52.12 50.38
HORVU3Hr1G065000.4 Barley cytosol 42.59 49.85
KRH36494 Soybean mitochondrion 52.38 47.03
GSMUA_Achr3P28930_001 Banana golgi 47.62 47.0
Os01t0695200-01 Rice plastid 44.71 46.56
TraesCS3A01G258700.1 Wheat golgi, mitochondrion, plastid 47.88 46.06
GSMUA_Achr9P21910_001 Banana golgi 46.83 45.85
TraesCS3D01G258800.1 Wheat golgi, mitochondrion, plastid 47.62 45.69
Zm00001d043768_P001 Maize golgi, mitochondrion, plastid 47.09 45.52
KXG33181 Sorghum golgi, mitochondrion, plastid 46.56 45.01
CDX69574 Canola mitochondrion 43.39 44.81
CDY09869 Canola mitochondrion 42.86 44.26
TraesCS3B01G291600.1 Wheat plastid 47.62 43.48
CDX80552 Canola cytosol 13.76 33.99
CDX89388 Canola cytosol 20.11 33.33
CDX78440 Canola cytosol 28.31 33.13
CDX73016 Canola mitochondrion 29.89 32.56
CDY31036 Canola golgi 32.01 32.1
CDY49466 Canola cytosol 21.43 31.52
CDX70417 Canola cytosol 24.87 31.33
CDX93443 Canola golgi 31.48 30.99
CDY03361 Canola mitochondrion 32.28 30.89
CDY66853 Canola mitochondrion 32.28 30.81
CDX94911 Canola golgi 31.22 30.65
CDY20644 Canola golgi 31.48 30.51
CDX83505 Canola mitochondrion 32.01 30.4
CDY12850 Canola mitochondrion 32.01 30.4
CDY01412 Canola mitochondrion 32.01 30.33
CDX82625 Canola mitochondrion 31.22 29.87
CDY51089 Canola golgi, mitochondrion 31.22 29.87
CDY51451 Canola golgi 29.89 29.66
CDX96026 Canola golgi 30.95 29.55
CDX94406 Canola golgi 29.37 29.29
CDX78674 Canola cytosol, golgi, plasma membrane 31.22 29.28
CDX70676 Canola cytosol, golgi, nucleus 30.95 29.1
CDX69735 Canola golgi 29.63 29.02
CDX97141 Canola golgi 29.63 29.02
CDX97139 Canola golgi 29.63 29.02
CDX68738 Canola golgi 28.84 28.99
CDY28259 Canola golgi 28.84 28.99
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 29.1 28.87
CDY19328 Canola golgi, mitochondrion 28.84 28.84
CDX87842 Canola golgi 29.63 28.79
CDY46724 Canola mitochondrion 30.69 28.78
CDY03552 Canola golgi, mitochondrion 30.42 28.68
CDY30178 Canola mitochondrion 30.42 28.61
CDY43927 Canola golgi 29.37 28.53
CDX88613 Canola golgi 29.1 28.28
CDY11878 Canola golgi 29.1 28.28
CDY42774 Canola mitochondrion 28.31 28.23
CDX96025 Canola golgi, vacuole 30.95 28.12
CDY44904 Canola golgi 30.42 28.05
CDX92736 Canola mitochondrion 28.04 27.97
CDX78439 Canola golgi 29.63 27.93
CDX81507 Canola golgi 30.16 27.8
CDY59035 Canola golgi 30.69 27.55
CDX69465 Canola golgi 29.37 27.41
CDY38285 Canola golgi 28.04 27.25
CDY25922 Canola golgi 28.04 27.25
CDX97140 Canola golgi 29.1 26.83
CDX88209 Canola golgi 24.6 26.57
CDY20597 Canola golgi 23.55 26.18
CDY26504 Canola cytosol 10.32 25.66
CDY66012 Canola mitochondrion 24.6 25.48
CDX70416 Canola golgi 29.37 25.4
CDY70337 Canola golgi 24.34 24.66
CDY57290 Canola cytosol 21.69 23.7
CDY14193 Canola mitochondrion 30.69 22.14
CDX97918 Canola golgi 27.51 16.48
CDX73017 Canola cytosol 0.26 7.14
Protein Annotations
EnsemblPlants:CDY34605EnsemblPlantsGene:GSBRNA2T00057051001GO:A0A078H7W6GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF2PFAM:PF02485ProteinID:CDY34605ProteinID:CDY34605.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EF226FUniProt:A0A078H7W6MapMan:35.1:::
Description
BnaC08g41640DBnaC08g41640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7W6]
Coordinates
chrLK032338:+:22748..25260
Molecular Weight (calculated)
43908.5 Da
IEP (calculated)
8.134
GRAVY (calculated)
-0.246
Length
378 amino acids
Sequence
(BLAST)
001: MTRKSQLHPV SRHGVVWLQW KLVIFLYVAL SLLSLLCIHL QYYSVTMLEP LSVAGSHIPP RKYPGDRPKV AFLFLTRRDL PLDFMWDRFF KGADQANFSV
101: YIHSQPGFVF NEETTRSHYF YNRQLNNSIN VIWGEYSMIE AERLLLSTAI DDHSNQRFVL LSDSCAPLYD FGYIYKYLIS SPRSFVDSFI NTKERRYSMN
201: MSSVIPEEKW RKGSQWISVI RSHAELIVND GIVFSAFEKF CKKAPPFGSQ EAQLFFRQNL RNCIPDEHYI QTLLTMSGLE NEMEPRTLTY TVWSVSGTKH
301: EAKSWHPVTF TFENSGPEDI QEIKSINHVN YESESRTEWC TSDSKSVPCF LFARKFTKEA AMRLVSEVLI GSSKNVAL
Best Arabidopsis Sequence Match ( AT1G11940.1 )
(BLAST)
001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.