Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY31228 | Canola | golgi | 77.51 | 79.19 |
CDY21023 | Canola | golgi | 78.04 | 78.46 |
AT1G11940.1 | Thale cress | golgi | 78.04 | 77.02 |
CDY08638 | Canola | mitochondrion | 63.23 | 63.06 |
CDY24895 | Canola | mitochondrion | 62.17 | 63.0 |
CDY66259 | Canola | cytosol | 70.37 | 61.86 |
VIT_10s0116g00980.t01 | Wine grape | golgi | 57.67 | 57.37 |
Solyc02g036250.1.1 | Tomato | cytosol | 22.75 | 54.78 |
KRH11480 | Soybean | mitochondrion | 53.44 | 53.58 |
PGSC0003DMT400042390 | Potato | golgi | 51.32 | 51.73 |
PGSC0003DMT400055283 | Potato | golgi | 50.53 | 51.34 |
Solyc02g080970.2.1 | Tomato | plastid | 52.12 | 50.38 |
HORVU3Hr1G065000.4 | Barley | cytosol | 42.59 | 49.85 |
KRH36494 | Soybean | mitochondrion | 52.38 | 47.03 |
GSMUA_Achr3P28930_001 | Banana | golgi | 47.62 | 47.0 |
Os01t0695200-01 | Rice | plastid | 44.71 | 46.56 |
TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 47.88 | 46.06 |
GSMUA_Achr9P21910_001 | Banana | golgi | 46.83 | 45.85 |
TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 47.62 | 45.69 |
Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 47.09 | 45.52 |
KXG33181 | Sorghum | golgi, mitochondrion, plastid | 46.56 | 45.01 |
CDX69574 | Canola | mitochondrion | 43.39 | 44.81 |
CDY09869 | Canola | mitochondrion | 42.86 | 44.26 |
TraesCS3B01G291600.1 | Wheat | plastid | 47.62 | 43.48 |
CDX80552 | Canola | cytosol | 13.76 | 33.99 |
CDX89388 | Canola | cytosol | 20.11 | 33.33 |
CDX78440 | Canola | cytosol | 28.31 | 33.13 |
CDX73016 | Canola | mitochondrion | 29.89 | 32.56 |
CDY31036 | Canola | golgi | 32.01 | 32.1 |
CDY49466 | Canola | cytosol | 21.43 | 31.52 |
CDX70417 | Canola | cytosol | 24.87 | 31.33 |
CDX93443 | Canola | golgi | 31.48 | 30.99 |
CDY03361 | Canola | mitochondrion | 32.28 | 30.89 |
CDY66853 | Canola | mitochondrion | 32.28 | 30.81 |
CDX94911 | Canola | golgi | 31.22 | 30.65 |
CDY20644 | Canola | golgi | 31.48 | 30.51 |
CDX83505 | Canola | mitochondrion | 32.01 | 30.4 |
CDY12850 | Canola | mitochondrion | 32.01 | 30.4 |
CDY01412 | Canola | mitochondrion | 32.01 | 30.33 |
CDX82625 | Canola | mitochondrion | 31.22 | 29.87 |
CDY51089 | Canola | golgi, mitochondrion | 31.22 | 29.87 |
CDY51451 | Canola | golgi | 29.89 | 29.66 |
CDX96026 | Canola | golgi | 30.95 | 29.55 |
CDX94406 | Canola | golgi | 29.37 | 29.29 |
CDX78674 | Canola | cytosol, golgi, plasma membrane | 31.22 | 29.28 |
CDX70676 | Canola | cytosol, golgi, nucleus | 30.95 | 29.1 |
CDX69735 | Canola | golgi | 29.63 | 29.02 |
CDX97141 | Canola | golgi | 29.63 | 29.02 |
CDX97139 | Canola | golgi | 29.63 | 29.02 |
CDX68738 | Canola | golgi | 28.84 | 28.99 |
CDY28259 | Canola | golgi | 28.84 | 28.99 |
CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 29.1 | 28.87 |
CDY19328 | Canola | golgi, mitochondrion | 28.84 | 28.84 |
CDX87842 | Canola | golgi | 29.63 | 28.79 |
CDY46724 | Canola | mitochondrion | 30.69 | 28.78 |
CDY03552 | Canola | golgi, mitochondrion | 30.42 | 28.68 |
CDY30178 | Canola | mitochondrion | 30.42 | 28.61 |
CDY43927 | Canola | golgi | 29.37 | 28.53 |
CDX88613 | Canola | golgi | 29.1 | 28.28 |
CDY11878 | Canola | golgi | 29.1 | 28.28 |
CDY42774 | Canola | mitochondrion | 28.31 | 28.23 |
CDX96025 | Canola | golgi, vacuole | 30.95 | 28.12 |
CDY44904 | Canola | golgi | 30.42 | 28.05 |
CDX92736 | Canola | mitochondrion | 28.04 | 27.97 |
CDX78439 | Canola | golgi | 29.63 | 27.93 |
CDX81507 | Canola | golgi | 30.16 | 27.8 |
CDY59035 | Canola | golgi | 30.69 | 27.55 |
CDX69465 | Canola | golgi | 29.37 | 27.41 |
CDY38285 | Canola | golgi | 28.04 | 27.25 |
CDY25922 | Canola | golgi | 28.04 | 27.25 |
CDX97140 | Canola | golgi | 29.1 | 26.83 |
CDX88209 | Canola | golgi | 24.6 | 26.57 |
CDY20597 | Canola | golgi | 23.55 | 26.18 |
CDY26504 | Canola | cytosol | 10.32 | 25.66 |
CDY66012 | Canola | mitochondrion | 24.6 | 25.48 |
CDX70416 | Canola | golgi | 29.37 | 25.4 |
CDY70337 | Canola | golgi | 24.34 | 24.66 |
CDY57290 | Canola | cytosol | 21.69 | 23.7 |
CDY14193 | Canola | mitochondrion | 30.69 | 22.14 |
CDX97918 | Canola | golgi | 27.51 | 16.48 |
CDX73017 | Canola | cytosol | 0.26 | 7.14 |
Protein Annotations
EnsemblPlants:CDY34605 | EnsemblPlantsGene:GSBRNA2T00057051001 | GO:A0A078H7W6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 |
PANTHER:PTHR31042:SF2 | PFAM:PF02485 | ProteinID:CDY34605 | ProteinID:CDY34605.1 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI0004EF226F | UniProt:A0A078H7W6 | MapMan:35.1 | : | : | : |
Description
BnaC08g41640DBnaC08g41640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7W6]
Coordinates
chrLK032338:+:22748..25260
Molecular Weight (calculated)
43908.5 Da
IEP (calculated)
8.134
GRAVY (calculated)
-0.246
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKSQLHPV SRHGVVWLQW KLVIFLYVAL SLLSLLCIHL QYYSVTMLEP LSVAGSHIPP RKYPGDRPKV AFLFLTRRDL PLDFMWDRFF KGADQANFSV
101: YIHSQPGFVF NEETTRSHYF YNRQLNNSIN VIWGEYSMIE AERLLLSTAI DDHSNQRFVL LSDSCAPLYD FGYIYKYLIS SPRSFVDSFI NTKERRYSMN
201: MSSVIPEEKW RKGSQWISVI RSHAELIVND GIVFSAFEKF CKKAPPFGSQ EAQLFFRQNL RNCIPDEHYI QTLLTMSGLE NEMEPRTLTY TVWSVSGTKH
301: EAKSWHPVTF TFENSGPEDI QEIKSINHVN YESESRTEWC TSDSKSVPCF LFARKFTKEA AMRLVSEVLI GSSKNVAL
101: YIHSQPGFVF NEETTRSHYF YNRQLNNSIN VIWGEYSMIE AERLLLSTAI DDHSNQRFVL LSDSCAPLYD FGYIYKYLIS SPRSFVDSFI NTKERRYSMN
201: MSSVIPEEKW RKGSQWISVI RSHAELIVND GIVFSAFEKF CKKAPPFGSQ EAQLFFRQNL RNCIPDEHYI QTLLTMSGLE NEMEPRTLTY TVWSVSGTKH
301: EAKSWHPVTF TFENSGPEDI QEIKSINHVN YESESRTEWC TSDSKSVPCF LFARKFTKEA AMRLVSEVLI GSSKNVAL
001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.