CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	92.86	3.11
CDX70417	Canola	cytosol	21.43	1.0
CDX78440	Canola	cytosol	21.43	0.93
CDY20597	Canola	golgi	21.43	0.88
CDY57290	Canola	cytosol	21.43	0.87
CDX88209	Canola	golgi	21.43	0.86
KRH60391	Soybean	golgi, plastid	21.43	0.8
CDY19328	Canola	golgi, mitochondrion	21.43	0.79
CDX97141	Canola	golgi	21.43	0.78
CDX97139	Canola	golgi	21.43	0.78
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	21.43	0.74
CDX97140	Canola	golgi	21.43	0.73
KRH35920	Soybean	golgi, plasma membrane	21.43	0.72
CDX96025	Canola	golgi, vacuole	21.43	0.72
KRG90861	Soybean	golgi, plasma membrane	21.43	0.71
CDY59035	Canola	golgi	21.43	0.71
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	21.43	0.7
KRH38159	Soybean	golgi	21.43	0.69
KRH48513	Soybean	golgi	21.43	0.67
KRH39163	Soybean	golgi	21.43	0.67
CDX69574	Canola	mitochondrion	14.29	0.55
CDY09869	Canola	mitochondrion	14.29	0.55
CDY70337	Canola	golgi	14.29	0.54
CDX68738	Canola	golgi	14.29	0.53
CDY28259	Canola	golgi	14.29	0.53
CDY31036	Canola	golgi	14.29	0.53
CDX93443	Canola	golgi	14.29	0.52
Solyc05g009110.1.1	Tomato	golgi	14.29	0.52
CDX94911	Canola	golgi	14.29	0.52
CDX69735	Canola	golgi	14.29	0.52
CDY20644	Canola	golgi	14.29	0.51
CDY51089	Canola	golgi, mitochondrion	14.29	0.51
CDY03361	Canola	mitochondrion	14.29	0.51
CDX82625	Canola	mitochondrion	14.29	0.51
CDY66853	Canola	mitochondrion	14.29	0.51
CDX96026	Canola	golgi	14.29	0.51
CDX83505	Canola	mitochondrion	14.29	0.5
CDY12850	Canola	mitochondrion	14.29	0.5
CDY01412	Canola	mitochondrion	14.29	0.5
CDY03552	Canola	golgi, mitochondrion	14.29	0.5
CDX70676	Canola	cytosol, golgi, nucleus	14.29	0.5
CDY30178	Canola	mitochondrion	14.29	0.5
CDY46724	Canola	mitochondrion	14.29	0.5
CDX69465	Canola	golgi	14.29	0.49
CDX81507	Canola	golgi	14.29	0.49
CDY44904	Canola	golgi	14.29	0.49
Solyc12g036400.1.1	Tomato	extracellular	14.29	0.49
PGSC0003DMT400013770	Potato	golgi	14.29	0.49
CDX97918	Canola	golgi	21.43	0.48
Os02t0327500-01	Rice	golgi	14.29	0.46
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	14.29	0.43
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	14.29	0.43
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	14.29	0.43
OQU84731	Sorghum	plastid	14.29	0.42
CDY14193	Canola	mitochondrion	14.29	0.38
CDY31228	Canola	golgi	7.14	0.27
CDY24895	Canola	mitochondrion	7.14	0.27
CDY21023	Canola	golgi	7.14	0.27
CDY34605	Canola	golgi	7.14	0.26
CDY08638	Canola	mitochondrion	7.14	0.26
CDY51451	Canola	golgi	7.14	0.26
PGSC0003DMT400037733	Potato	golgi	7.14	0.26
CDX87842	Canola	golgi	7.14	0.26
CDY43927	Canola	golgi	7.14	0.26
Solyc05g009120.2.1	Tomato	nucleus	7.14	0.26
CDX78439	Canola	golgi	7.14	0.25
CDX78674	Canola	cytosol, golgi, plasma membrane	7.14	0.25
CDX70416	Canola	golgi	7.14	0.23
Zm00001d053393_P002	Maize	golgi, plastid	7.14	0.22
PGSC0003DMT400037735	Potato	cytosol	0.0	0.0
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	0.0	0.0
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	0.0	0.0
VIT_17s0000g03410.t01	Wine grape	cytosol	0.0	0.0
VIT_17s0000g03400.t01	Wine grape	cytosol	0.0	0.0
CDX73016	Canola	mitochondrion	0.0	0.0
TraesCS1D01G394500.1	Wheat	mitochondrion	0.0	0.0
CDX80552	Canola	cytosol	0.0	0.0
CDX88613	Canola	golgi	0.0	0.0
CDX89388	Canola	cytosol	0.0	0.0
CDX92736	Canola	mitochondrion	0.0	0.0
CDX94406	Canola	golgi	0.0	0.0
CDY11878	Canola	golgi	0.0	0.0
HORVU1Hr1G085260.1	Barley	cytosol	0.0	0.0
CDY25922	Canola	golgi	0.0	0.0
PGSC0003DMT400014396	Potato	cytosol	0.0	0.0
CDY26504	Canola	cytosol	0.0	0.0
CDY38285	Canola	golgi	0.0	0.0
CDY42774	Canola	mitochondrion	0.0	0.0
CDY49466	Canola	cytosol	0.0	0.0
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	0.0	0.0
KRH41690	Soybean	golgi	0.0	0.0
CDY66012	Canola	mitochondrion	0.0	0.0
CDY66259	Canola	cytosol	0.0	0.0
GSMUA_Achr6P09800_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX73017

EnsemblPlantsGene:GSBRNA2T00103458001

ProteinID:CDX73017

ProteinID:CDX73017.1

UniParc:UPI0004EDCACC

MapMan:35.2

Description

BnaC06g34650D

Coordinates

chrLK031797:-:1679466..1679510

Molecular Weight (calculated)

1652.9 Da

IEP (calculated)

4.426

GRAVY (calculated)

-1.864

Length

14 amino acids

Sequence
(BLAST)

1: MKTKSQETQE DSLQ

Best Arabidopsis Sequence Match ( AT1G73810.1 )
(BLAST)

001: MKKSQETQED SLQQESRHQL HQIVISKILR SHRFFQNLVL YSFLIGFGFG LGFILNVHIR NVSFNPQLFR LSSLSPSSFS TPPLQPQPEI VVPLNDTVVA
101: TNDDDHEVGQ KGHYLMMPEN VVHNMTEEEL LLRASKIQEK TLKMTKKAAF MFLTRGKLPL AKLWERFFKG HEGLFSIYIH TSDPFYFDDH TPETSPFYRR
201: RIPSKEVGWG MVSMVAAERR LLANALLDAG NHRFVLLSES DIPLFNFSTI YSYLINSQHS YVDVYDLPGP AGRGRYNRRM SPVISRTNWR KGSQWFEIDR
301: EVALAVVSDT TYFPVFEKYC LWNCYADEHY LSTFVHAMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVTG EFLRRVRNRE QGCVYNGKKS EKCYLFARKF
401: DGSTLDKLLY FAHSVMGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T1]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.