Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- golgi 3
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90861 | Soybean | golgi, plasma membrane | 94.46 | 93.11 |
| KRH38159 | Soybean | golgi | 66.51 | 63.16 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 40.24 | 60.07 |
| KRH60391 | Soybean | golgi, plastid | 51.33 | 56.65 |
| KRH41690 | Soybean | golgi | 49.64 | 55.38 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 38.07 | 54.11 |
| KRH01729 | Soybean | cytosol | 38.31 | 52.82 |
| KRH46947 | Soybean | cytosol | 38.07 | 52.49 |
| KRH48513 | Soybean | golgi | 56.39 | 52.35 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 30.12 | 52.08 |
| CDX73016 | Canola | mitochondrion | 42.17 | 50.43 |
| KRH39163 | Soybean | golgi | 54.22 | 49.89 |
| Bra015963.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 41.93 | 49.71 |
| KRH48972 | Soybean | cytosol | 24.82 | 48.36 |
| KRH13326 | Soybean | cytosol | 24.34 | 47.42 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 47.23 | 46.89 |
| KRH05512 | Soybean | nucleus | 42.65 | 46.46 |
| KRH15500 | Soybean | nucleus | 41.93 | 45.79 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 41.69 | 44.7 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 41.45 | 44.44 |
| KRH26270 | Soybean | golgi | 40.96 | 44.39 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 41.45 | 43.65 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 42.41 | 39.46 |
| Os02t0327500-01 | Rice | golgi | 41.69 | 39.41 |
| OQU84731 | Sorghum | plastid | 45.06 | 38.96 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 41.69 | 38.53 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 42.89 | 38.36 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 42.17 | 37.47 |
| KRH16109 | Soybean | mitochondrion | 33.01 | 34.77 |
| KRH19073 | Soybean | golgi | 32.29 | 34.1 |
| KRH05009 | Soybean | golgi, mitochondrion | 32.05 | 33.76 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 37.59 | 33.19 |
| KRH56549 | Soybean | golgi | 28.67 | 32.69 |
| KRH02808 | Soybean | golgi | 32.29 | 31.9 |
| KRG93228 | Soybean | golgi | 27.95 | 31.35 |
| KRH11480 | Soybean | mitochondrion | 27.95 | 30.77 |
| KRH36494 | Soybean | mitochondrion | 28.43 | 28.03 |
| CDX73017 | Canola | cytosol | 0.72 | 21.43 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02006706 | EnsemblPlantsGene:GLYMA_10G272000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | UniProt:I1LEU5 |
| EnsemblPlants:KRH35920 | ProteinID:KRH35920 | ProteinID:KRH35920.1 | PFAM:PF02485 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF17 |
| TMHMM:TMhelix | UniParc:UPI000233D0E7 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:49419913..49423074
Molecular Weight (calculated)
48019.5 Da
IEP (calculated)
8.109
GRAVY (calculated)
-0.310
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGQNNQYPL NSVSKFFNAQ FHFIQFLTYI LILGFGITIG VIFSFYLKDC NFSLQFTQLS LSSFPRTPPL PPPTAKPEIS NQSQPRTQIQ AQTQIQTETQ
101: METENSHVGL KEFLKPPPVV HDMDDEEMLW RASMTAKIPD YPFDRVPKVA FMFLTRGPVF LAPLWEQFFK GHEGFYSIYV HSNPSYNGSR PESPVFKGRR
201: IPSKEVEWGN VNMIEAERRL LANALVDISN QRFVLLSESC IPLFNFSTIY TYLMNSTQNY VMAFDDPSSV GRGRYSIQML PEISLNQWRK GSQWFEMDRD
301: LALEVVSDRK YFPVFQDYCK GSCYADEHYL PTYVSIKFWE GNSNRSLTWV DWSKGGPHPT KFLRSEITVK FLESLRDQKC EYNGDSINVC FLFARKFAPG
401: SVSKLTKIAP MVMHF
101: METENSHVGL KEFLKPPPVV HDMDDEEMLW RASMTAKIPD YPFDRVPKVA FMFLTRGPVF LAPLWEQFFK GHEGFYSIYV HSNPSYNGSR PESPVFKGRR
201: IPSKEVEWGN VNMIEAERRL LANALVDISN QRFVLLSESC IPLFNFSTIY TYLMNSTQNY VMAFDDPSSV GRGRYSIQML PEISLNQWRK GSQWFEMDRD
301: LALEVVSDRK YFPVFQDYCK GSCYADEHYL PTYVSIKFWE GNSNRSLTWV DWSKGGPHPT KFLRSEITVK FLESLRDQKC EYNGDSINVC FLFARKFAPG
401: SVSKLTKIAP MVMHF
001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.