CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
mitochondrion 2
plastid 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48972	Soybean	cytosol	54.01	98.12
KRH13326	Soybean	cytosol	53.75	97.65
KRH44223	Soybean	cytosol, golgi, plasma membrane	94.32	94.32
VIT_09s0002g02660.t01	Wine grape	cytosol	58.66	77.21
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	68.73	69.09
PGSC0003DMT400006434	Potato	golgi, nucleus, plasma membrane	68.73	68.91
KRH05512	Soybean	nucleus	64.34	65.35
PGSC0003DMT400012489	Potato	golgi	61.76	64.08
AT3G21310.1	Thale cress	golgi	63.31	63.97
KRH15500	Soybean	nucleus	62.79	63.95
Solyc06g062490.2.1	Tomato	golgi	60.72	63.51
Bra031273.1-P	Field mustard	golgi	62.02	62.99
CDY43927	Canola	golgi	63.31	62.98
Bra030418.1-P	Field mustard	golgi	63.31	62.98
GSMUA_Achr1P14240_001	Banana	golgi	58.14	62.85
CDY51451	Canola	golgi	61.76	62.73
CDX87842	Canola	golgi	63.05	62.72
EER93518	Sorghum	golgi, plasma membrane, plastid	62.02	62.18
GSMUA_Achr3P25730_001	Banana	golgi	57.11	61.56
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	59.95	60.89
AT1G51770.1	Thale cress	golgi	63.82	60.84
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	57.36	60.82
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	61.24	60.46
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	60.98	60.36
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	60.72	59.95
EER93516	Sorghum	golgi	58.14	59.21
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	60.21	58.25
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	58.4	56.22
Zm00001d033890_P001	Maize	golgi	60.72	55.82
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	57.11	54.84
Os03t0731050-00	Rice	plastid	56.33	50.93
KRH46947	Soybean	cytosol	39.53	50.83
KRH01729	Soybean	cytosol	39.28	50.5
KRH26270	Soybean	golgi	45.74	46.21
KRH41690	Soybean	golgi	43.67	45.43
KRH60391	Soybean	golgi, plastid	43.93	45.21
KRH06031	Soybean	golgi, plasma membrane, plastid	45.99	45.18
KRH35920	Soybean	golgi, plasma membrane	44.7	41.69
KRG90861	Soybean	golgi, plasma membrane	44.96	41.33
KRH38159	Soybean	golgi	44.96	39.82
KRH48513	Soybean	golgi	45.48	39.37
KRH39163	Soybean	golgi	45.48	39.02
KRH16109	Soybean	mitochondrion	36.43	35.79
KRH05009	Soybean	golgi, mitochondrion	35.66	35.03
KRH19073	Soybean	golgi	34.88	34.35
KRH11480	Soybean	mitochondrion	33.07	33.95
KRH56549	Soybean	golgi	31.27	33.24
KRG93228	Soybean	golgi	30.75	32.16
KRH02808	Soybean	golgi	34.88	32.14
KRH36494	Soybean	mitochondrion	33.59	30.88

Protein Annotations

EMBL:ACUP02004138	EnsemblPlants:KRH47176	EnsemblPlantsGene:GLYMA_07G013400	EntrezGene:100793448	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
PANTHER:PTHR31042	PANTHER:PTHR31042:SF54	PFAM:PF02485	ProteinID:KRH47176	ProteinID:KRH47176.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002337D94	UniProt:I1KGG0	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:1028243..1033837

Molecular Weight (calculated)

44801.2 Da

IEP (calculated)

9.326

GRAVY (calculated)

-0.215

Length

387 amino acids

Sequence
(BLAST)

001: MQSRLEEGKD PAGFRTTPSR PFPLRLLQFF LAFLVIGLGA SFLSMYMIRH FGIHNVALVQ SSFKPCFEQP ATLESWIRPR SSLLHTMNDT ELFWRASFVP
101: RIKSYPFKRT PKIAFMFLTK GPLPMAPLWE KFFRGHEGLY SIYVHSLPSY NADFSPSSVF YRRQIPSQVA EWGMMSMCDA ERRLLANALL DISNEWFILL
201: SESCIPLQNF SIVYLYIARS RYSFMGAVDE PGPYGRGRYD GNMAPEINMS DWRKGSQWFE INRELALRIV EDNTYYPKLK EFCKPHKCYV DEHYFQTMLT
301: INTPHLLANR SLTYVDWSRG GAHPATFGKD DIKEEFFKKI LQDQTCLYNN QPSSLCFLFA RKFAPNALGP LLDIAPKALG IGKRHSF

Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.