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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43927 Canola golgi 98.71 98.71
AT1G51770.1 Thale cress golgi 83.29 79.8
CDY51451 Canola golgi 71.72 73.23
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 70.95 72.44
KRH48972 Soybean cytosol 36.5 66.67
VIT_09s0002g02660.t01 Wine grape cytosol 50.13 66.33
KRH13326 Soybean cytosol 35.99 65.73
KRH47176 Soybean cytosol, golgi, plasma membrane 62.72 63.05
KRH44223 Soybean cytosol, golgi, plasma membrane 61.18 61.5
CDX80552 Canola cytosol 23.91 60.78
Solyc03g121280.2.1 Tomato golgi, nucleus, plasma membrane 58.87 59.48
EER93518 Sorghum golgi, plasma membrane, plastid 57.84 58.29
PGSC0003DMT400006434 Potato golgi, nucleus, plasma membrane 57.58 58.03
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 54.24 57.81
PGSC0003DMT400012489 Potato golgi 55.27 57.64
CDX69735 Canola golgi 57.07 57.51
CDX78440 Canola cytosol 47.56 57.28
Solyc06g062490.2.1 Tomato golgi 53.98 56.76
CDX97141 Canola golgi 56.3 56.74
CDX97139 Canola golgi 56.3 56.74
GSMUA_Achr3P25730_001 Banana golgi 52.19 56.55
EER93516 Sorghum golgi 54.76 56.05
GSMUA_Achr1P14240_001 Banana golgi 50.9 55.31
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 55.27 54.85
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 55.01 54.73
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 54.76 54.34
CDX88209 Canola golgi 48.59 54.0
EER93517 Sorghum golgi, mitochondrion, plasma membrane 55.78 53.98
CDX70417 Canola cytosol 41.13 53.33
HORVU4Hr1G010270.2 Barley golgi, peroxisome 54.5 53.0
Zm00001d033890_P001 Maize golgi 57.07 52.73
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 54.5 52.61
CDX78439 Canola golgi 53.73 52.12
CDX97140 Canola golgi 54.76 51.95
Os03t0731050-00 Rice plastid 54.24 49.3
CDX70416 Canola golgi 53.73 47.83
CDY31036 Canola golgi 45.76 47.21
CDX94911 Canola golgi 46.02 46.49
CDX93443 Canola golgi 45.5 46.09
CDY20644 Canola golgi 45.5 45.38
CDX73016 Canola mitochondrion 39.59 44.38
CDX96025 Canola golgi, vacuole 47.3 44.23
CDY59035 Canola golgi 47.04 43.47
CDY44904 Canola golgi 45.5 43.17
CDX81507 Canola golgi 45.24 42.93
CDX96026 Canola golgi 43.44 42.68
CDY19328 Canola golgi, mitochondrion 40.62 41.8
CDX69465 Canola golgi 42.93 41.23
CDX70676 Canola cytosol, golgi, nucleus 42.16 40.8
CDY20597 Canola golgi 35.48 40.59
CDY26504 Canola cytosol 15.68 40.13
CDX78674 Canola cytosol, golgi, plasma membrane 41.39 39.95
CDX89388 Canola cytosol 23.14 39.47
CDY70337 Canola golgi 35.22 36.73
CDX83505 Canola mitochondrion 37.53 36.68
CDY12850 Canola mitochondrion 37.53 36.68
CDY01412 Canola mitochondrion 37.53 36.59
CDY49466 Canola cytosol 24.16 36.58
CDX68738 Canola golgi 35.22 36.44
CDY28259 Canola golgi 34.96 36.17
CDY42774 Canola mitochondrion 34.7 35.62
CDX92736 Canola mitochondrion 34.7 35.62
CDY03552 Canola golgi, mitochondrion 36.5 35.41
CDX94406 Canola golgi 34.19 35.09
CDY03361 Canola mitochondrion 35.22 34.68
CDY66853 Canola mitochondrion 34.96 34.34
CDX82625 Canola mitochondrion 34.7 34.18
CDY51089 Canola golgi, mitochondrion 34.45 33.92
CDY30178 Canola mitochondrion 34.96 33.83
CDY46724 Canola mitochondrion 34.96 33.75
CDX88613 Canola golgi 33.42 33.42
CDY11878 Canola golgi 33.42 33.42
CDY08638 Canola mitochondrion 32.39 33.25
CDY38285 Canola golgi 33.16 33.16
CDY24895 Canola mitochondrion 31.62 32.98
CDY25922 Canola golgi 32.9 32.9
CDY31228 Canola golgi 31.11 32.7
CDY57290 Canola cytosol 29.05 32.66
CDX69574 Canola mitochondrion 29.31 31.15
CDY21023 Canola golgi 30.08 31.12
CDY09869 Canola mitochondrion 29.05 30.87
CDY66012 Canola mitochondrion 28.53 30.41
CDY34605 Canola golgi 28.79 29.63
CDY14193 Canola mitochondrion 36.5 27.1
CDX97918 Canola golgi 37.79 23.3
CDY66259 Canola cytosol 25.71 23.26
CDX73017 Canola cytosol 0.26 7.14
Protein Annotations
EnsemblPlants:CDX87842EnsemblPlantsGene:GSBRNA2T00147011001GO:A0A078DFQ0GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF54
PFAM:PF02485ProteinID:CDX87842ProteinID:CDX87842.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE6980
MapMan:35.1:::::
Description
BnaC06g09040D
Coordinates
chrLK031852:+:556653..557903
Molecular Weight (calculated)
44657.2 Da
IEP (calculated)
8.598
GRAVY (calculated)
-0.127
Length
389 amino acids
Sequence
(BLAST)
001: MKVMDMEEGV KDNAASPPPK SRITNQSRAL VSIRLLQVLL LFLVLTLGIS VVSIHMIKFF KIQDPVSSTT LVSMYDHEAV TLESFLRPPL NVWHTMNDGE
101: LLWRASMEPK RHDYPFKRVP KLAFMFLTKG PLPFAPLWEM FFKGHEGLYS IYVHALPNYR SDFDRSSVFY RRYIPSQAVA WGEMSMCDAE RRLLASALLD
201: ISNEWFVLLS ESCIPLSGFG FIYGYVSGSR YSFMGCADEE GPDGRGRYRN GMEPEITLSQ WRKGSQWFEI NRKLALEIVQ DITYYPKFKE FCKPPCYVDE
301: HYFPTMLSMK HRIFLANRTL TYTDWSRGGA HPATFGKADV TEAFLKNLPG AKACLYNDQR SPVCYLFARK FAPSALEPLL ELAPKILGF
Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)
001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.