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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30178 Canola mitochondrion 97.27 97.51
AT4G30060.1 Thale cress golgi 88.09 88.53
CDY03552 Canola golgi, mitochondrion 87.84 88.28
CDY66853 Canola mitochondrion 74.19 75.51
CDY03361 Canola mitochondrion 73.2 74.68
CDY12850 Canola mitochondrion 71.96 72.86
CDX83505 Canola mitochondrion 71.96 72.86
CDY01412 Canola mitochondrion 71.96 72.68
CDY51089 Canola golgi, mitochondrion 69.23 70.63
CDX82625 Canola mitochondrion 69.23 70.63
CDX89388 Canola cytosol 39.21 69.3
CDY14193 Canola mitochondrion 88.59 68.13
CDY49466 Canola cytosol 41.19 64.59
KRH19073 Soybean golgi 62.53 64.12
CDY25922 Canola golgi 60.79 62.98
CDY38285 Canola golgi 60.79 62.98
CDX94406 Canola golgi 59.06 62.8
CDX92736 Canola mitochondrion 58.81 62.53
CDX88613 Canola golgi 60.3 62.47
CDY11878 Canola golgi 60.3 62.47
Solyc07g008940.2.1 Tomato golgi 60.79 62.34
CDY42774 Canola mitochondrion 58.56 62.27
PGSC0003DMT400073984 Potato golgi 60.05 61.58
VIT_11s0103g00490.t01 Wine grape golgi, plastid 60.55 60.55
KRH02808 Soybean golgi 62.78 60.24
HORVU2Hr1G100480.3 Barley cytosol 45.91 56.92
CDY28259 Canola golgi 52.61 56.38
CDX68738 Canola golgi 52.61 56.38
CDY66012 Canola mitochondrion 50.87 56.16
Zm00001d024348_P002 Maize mitochondrion 50.87 55.41
KXG24737 Sorghum golgi 52.61 55.35
Zm00001d026261_P001 Maize golgi, mitochondrion 52.61 55.35
EES12818 Sorghum golgi 53.1 55.3
Zm00001d002382_P002 Maize golgi, mitochondrion 52.36 54.52
TraesCS2D01G428700.2 Wheat mitochondrion 50.12 53.16
TraesCS2B01G452200.4 Wheat mitochondrion 49.88 52.89
CDY57290 Canola cytosol 45.16 52.6
TraesCS2A01G430900.2 Wheat mitochondrion 49.63 51.81
Os08t0225400-01 Rice cytosol, golgi 52.36 51.09
CDX78440 Canola cytosol 31.51 39.32
CDX73016 Canola mitochondrion 32.75 38.04
CDX70417 Canola cytosol 27.79 37.33
CDX80552 Canola cytosol 13.4 35.29
CDY31036 Canola golgi 33.0 35.28
CDX94911 Canola golgi 33.5 35.06
CDY43927 Canola golgi 33.75 34.96
CDX87842 Canola golgi 33.75 34.96
CDX93443 Canola golgi 33.25 34.9
CDX69735 Canola golgi 33.25 34.72
CDX97141 Canola golgi 33.25 34.72
CDX97139 Canola golgi 33.25 34.72
CDX78674 Canola cytosol, golgi, plasma membrane 34.49 34.49
CDY51451 Canola golgi 32.51 34.38
CDY20644 Canola golgi 33.25 34.36
CDX70676 Canola cytosol, golgi, nucleus 33.99 34.08
CDX69465 Canola golgi 34.24 34.07
CDX78439 Canola golgi 33.75 33.92
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 32.01 33.86
CDY08638 Canola mitochondrion 31.76 33.77
CDY24895 Canola mitochondrion 31.02 33.51
CDX97140 Canola golgi 33.5 32.93
CDX96026 Canola golgi 32.26 32.83
CDY19328 Canola golgi, mitochondrion 30.77 32.8
CDX69574 Canola mitochondrion 29.78 32.79
CDX96025 Canola golgi, vacuole 33.75 32.69
CDY09869 Canola mitochondrion 29.53 32.51
CDX81507 Canola golgi 33.0 32.44
CDY26504 Canola cytosol 12.16 32.24
CDY44904 Canola golgi 32.75 32.2
CDY59035 Canola golgi 33.5 32.07
CDX88209 Canola golgi 27.54 31.71
CDX70416 Canola golgi 33.75 31.12
CDY34605 Canola golgi 28.78 30.69
CDY21023 Canola golgi 28.29 30.32
CDY20597 Canola golgi 25.56 30.29
CDY31228 Canola golgi 27.54 30.0
CDY70337 Canola golgi 25.31 27.35
CDY66259 Canola cytosol 24.32 22.79
CDX97918 Canola golgi 29.78 19.02
CDX73017 Canola cytosol 0.5 14.29
Protein Annotations
EnsemblPlants:CDY46724EnsemblPlantsGene:GSBRNA2T00086036001GO:A0A078IBJ7GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF1PFAM:PF02485ProteinID:CDY46724ProteinID:CDY46724.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE7C9DUniProt:A0A078IBJ7MapMan:35.1:::
Description
BnaC07g42290DBnaC07g42290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBJ7]
Coordinates
chrLK032682:-:151262..153350
Molecular Weight (calculated)
47159.0 Da
IEP (calculated)
8.677
GRAVY (calculated)
-0.295
Length
403 amino acids
Sequence
(BLAST)
001: MKAAKRWSVG NLASLPGARH RVPARRRLWI IMSLSLIIMT LSLITMLAIM AYMYPHHSKR ACYMISSRGC KALADWLPPS LREYSDDEIA ARVVIREIMS
101: NAPVIRRDSK IAFMFLTPGT LPFERLWDRF FQGHEGKFSV YIHASKERPV HHSHYFLDRE IRSDEVVWGR ISMVDAERRL LANALRDPAN QQFVLLSESC
201: VPLRSFEYIY NYLMYSNLSY VDCFDDPGQH GSGRHMDHML PEIPKKYFRK GAQWFTMKRQ HAIVIMADSL YYSRFRDYCG PGIENNKNCI ADEHYLPTFF
301: HMLDPGGISN WSVTQVDWSE RQWHPKTYMP EDVTHELLNN LTSTDTVVHV TSVGMQGEEI WMPCMWNGIK RPCFLFGRKF HPDTLDKLLD LFSNYTRSVS
401: WHL
Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)
001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.